Synthesis, characterization, X-ray crystallography and DNA binding activities of Co(III) and Cu(II) complexes with a pyrimidine-based Schiff base ligand

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• Synthesis of a new pyrimidine based ‘NNO’ tridentate Schiff base ligand.
• X-ray crystallography of the Schiff base ligand and its Co(III) and Cu(II) complexes.
• 2D and 3D hydrogen bonding interactions.
• DNA binding activities of the synthesized compounds.
• Intercalation mode of DNA interaction.

A new pyrimidine based ‘NNO’ tridentate ligand 2,4-dihydroxyacetophenone-2-hydrazino-4,6-dimethylpyrimidine (H2MHyP) (compound I) has been synthesized and characterized by elemental analyses, mass, IR 1H NMR spectra and X-ray crystallographic studies. The Coordination mode of the synthesized ligand has been established by solid state isolation and physico-chemical identification of Co(III) and Cu(II) complexes, [Co(HMHyP)2]Cl (compound II), [Co(HMHyP)2]Br (compound III) and [Cu(HMHyP)]NO3 (compound IV) respectively. All the reported coordination complexes are 1:1 electrolytic cationic species and the ligand behaves as a monodeprotonated ‘NNO’ tridentate one in all the complex species. IR spectral data indicate that the coordination of each of the metal centre of the complexes occurs through the pyrimidine nitrogen, azomethine nitrogen and hydroxyl oxygen atoms. X-ray crystallographic data have authenticated a CoN4O2 octahedral coordination for II and III (triclinic (P1¯) and monoclinic (P21/n), respectively) and a CuN2O2 square planar coordination for IV (triclinic (P1¯)). All the synthesized compounds were tested for their DNA binding abilities and their mode of binding with DNA. Compounds II, III and IV show potential DNA binding activities with Salmon Testis DNA.

A new pyrimidine based Schiff base ligand and its Co(III) and Cu(II) complexes have been synthesized. The structural conformations of Co(III) and Cu(II) complexes have been established by X-ray studies and the detailed DNA binding activities and mode of DNA binding with metal complexes have been reported.Figure optionsDownload as PowerPoint slide