Trends in sample preparation for classical and second generation proteomics
Keywords: Proteomics; Sample preparation; 2-DE; ESI; MALDI; Protein digestion
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Application of a suite of biomarkers in Posidonia oceanica (L.) delile to assess the ecotoxicological impact on the coastal environment
Keywords: Posidonia oceanica; Biomarkers; NADPH cytochrome reductase; ECOD; Peroxidase; Superoxide dismutase; 2-DE; Trace elements; OCs; PAHs;
Identification of freshwater fish commercially labelled “perch” by isoelectric focusing and two-dimensional electrophoresis
Keywords: IEF; 2-DE; Fish species; Perch; Identification
Identification of chitotriosidase isoforms in plasma of Gaucher disease patients by two dimensional gel electrophoresis
Keywords: GD, Gaucher disease; ChT, chitotriosidaseGaucher disease; Chitotriosidase; Biomarker; 2-DE
Inner ear proteomics: A fad or hear to stay
Keywords: Proteomic; Inner ear; 2-DE; Systems analysis;
Strain-dependent expression of signaling proteins in the mouse hippocampus
Keywords: protein expression; brain; inbred mouse strain; proteomics; synaptic plasticity; Balb; Balb/c; C57; C57BL/6J; CaMKII; Ca2+/calmodulin kinase II; DTT; 1,4-dithioerythritol; EDTA; ethylenediaminetraacetic acid; FVB; FVB/N; GNB1; guanine nucleotide-binding p
Protein/RNA coextraction and small two-dimensional polyacrylamide gel electrophoresis for proteomic/gene expression analysis of renal cancer biopsies
Keywords: Biopsy; 2-DE; Kidney; MALDI–TOF; Q-TOF; Real-time PCR
Casting light on molecular events underlying anti-cancer drug treatment: What can be seen from the proteomics point of view?
Keywords: Drug development; Drug resistance; Drug target; Proteomics; 2-DE; Mass spectrometry; Anti-cancer compounds
Induction of OS-2 phosphorylation in Neurospora crassa by treatment with phenylpyrrole fungicides and osmotic stress
Keywords: Fungicide; Fenpiclonil; Fludioxonil; Neurospora crassa; Osmotic stress; Mitogen-activated protein kinase; Protein phosphorylation; 2-DE; MALDI-MS
The protein composition of honeybee venom reconsidered by a proteomic approach
Keywords: 2-DE; two-dimensional gel electrophoresis; ESI; electrospray ionization; EST; expressed sequence tag; IEF; isoelectric focusing; IPG; immobilized pH gradient; IUIS; International Union of Immunology Societies; LC; liquid chromatography; MALDI; matrix-assi
The use of live three-dimensional Doppler echocardiography in the measurement of cardiac output
Keywords: AV; aortic valve; CO; cardiac output; CPB; cardiopulmonary bypass; LVOT; left ventricular outflow tract; PW; pulse wave; 2-D; two-dimensional; 2-DE; two-dimensional echocardiography; 3-D; three-dimensional; 3-DE; three-dimensional echocardiography;
Differential change in root protein patterns of two wheat varieties under high and low nitrogen nutrition levels
Keywords: 2-DE; two dimensional electrophoresis; FW; fresh weight; DW; dry weight; GS; glutamine synthetase; GDH; glutamate dehydrogenase; NR; nitrate reductase; NO3; nitrate; Diversity; Nitrogen nutrition; Proteome; Triticum aestivum L.;
Proteomics in Rheumatology: A New Direction for Old Diseases
Keywords: rheumatoid arthritis; osteoarthritis; nuclear magnetic resonance spectroscopy; surface plasmon resonance; mass spectrometry; CPMG; Carr-Purcell-Meiaboom-Gill; CSF; cerebrospinal fluid; CD; circular dichroism; CP; core peptide; 2D; 2-dimensional; DMPC; dim
Proteome analysis of rat pancreas induced by pancreatectomy
Keywords: 2-DE; 2-dimensional electrophoresis; RPE; regenerating pancreatic extract; STZ; streptozotocin; MS; mass spectrometry; PBS; phosphate buffered saline; FBS; fetal bovine serum; MALDI-TOF; matrix-assisted laser-desorption/ionization time of flight; MTT; C,N
Monitoring the stability of Rubisco in micropropagated grapevine (Vitis vinifera L.) by two-dimensional electrophoresis
Keywords: 2-DE; acclimatization; LSU degradation; ribulose-1,5-bisphosphate carboxylase/oxygenase; Vitis vinifera; 2-DE; two-dimensional electrophoresis; CHAPS; 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate; DTT; dithiothreitol; EDTA; ethylene diamine t
Proteomics of bronchoalveolar lavage fluid
Keywords: 2-DE; two-dimensional gel electrophoresis; AOP2; antioxidant protein 2; BALF; bronchoalveolar lavage fluid; CC16; clara cell protein 16; ELF; epithelial lining fluid; ESI-MS-MS; electrospray ionisation tandem mass spectrometry; ICAT; isotope-coded aff
Modification of photosynthetic regulation in tomato overexpressing glutathione peroxidase
Keywords: 2-DE; two-dimensional electrophoresis; AOS; active oxygen species; F1-6BP; fructose-1,6-Bisphosphatase; FBPA-2; fructose bisphosphate aldolase 2; GPX; glutathione peroxidase; NPTII; neomycin phosphotransferase II; Ran-BP1; Ran-binding protein-1;
Evaluation of two anti-gp91phox antibodies as immunoprobes for Nox family proteins: mAb 54.1 recognizes recombinant full-length Nox2, Nox3 and the C-terminal domains of Nox1-4 and cross-reacts with GRP 58
Keywords: 2-DE; two dimensional electrophoresis; ASB-14; amidosulfobetaine-14; ATP; adenosine 5â²-triphosphate; BCIP/NBT; 5-bromo-4-chloro-3-indolyl phosphate/nitro blue tetrazolium; CHAPS; (3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate; CGD; chronic g
An efficient proteomics-based approach for the screening of autoantibodies
Keywords: 2-DE; two-dimensional gel electrophoresis; 2D-blotting; Western blotting following 2-DE; PVDF; polyvinylidene fluoride; 2D-blot; PVDF membrane after 2D-blotting; MS; mass spectrometry; ISB; isotachophoresis-based method for blotting; BCP; breast cancer pa
Proteomic analysis of glial fibrillary acidic protein in Alzheimer's disease and aging brain
Keywords: AD; Alzheimer's disease; APP; amyloid precursor protein; AUC; area under curve; βA; beta-amyloid; CTM; co-translational modification; 1-D; one-dimensional; 2-D; two-dimensional; 2-DE; two-dimensional gel electrophoresis; ER; endoplasmatic reticulum; GFAP
Role of proteomics in taxonomy: the Mytilus complex as a model of study
Keywords: Mytilus; Proteomics; Taxonomy; 2-DE;
Proteomics of wheat grain
Keywords: Grain quality; Wheat; Barley; Endosperm proteins; alpha-Amylase inhibitors; Puroindolines; Protein disulfide isomerase; Heat-shock proteins; Cultivar identification; 2-DE; two-dimensional gel electrophoresis; CID; collision-induced dissociation; DPA; days
Differential signatures of protein expression in marmoset liver and thymus induced by single-dose TCDD treatment
Keywords: Proteomics; Biomarker; 2-DE; Marmoset; 2,3,7,8-Tetrachlorodibenzo-p-dioxin; TCDD;
A chemometric evaluation of the underlying physical and chemical patterns that support near infrared spectroscopy of barley seeds as a tool for explorative classification of endosperm genes and gene combinations
Keywords: Near infrared spectroscopy; Barley mutants; Physico-chemical fingerprinting; Chemometric classification; Phenome; Proteome; 2-DE; two-dimensional electrophoresis; A; amide % d.m.; A/P; index between A and P content; BG; (1â3, 1â4)-β-glucan; BG+S; sum
Biofilm formation of Pseudomonas putida IsoF: the role of quorum sensing as assessed by proteomics
Keywords: QS; quorum sensing; AHL; N-acylhomoserine lactone; 2-DE; two-dimensional gelelectrophoresis; MALDI-TOF MS; matrix-assisted time-of-flight mass spectrometry.; Pseudomonas putida; Biofilm; Quorum sensing; Gene regulation; Proteomics;
Searching for hypothetical proteins: Theory and practice based upon original data and literature
Keywords: 2-DE; two-dimensional gel electrophoresis; 3D-PSSM; three-dimensional position-specific scoring matrix; ANN; artificial neural networks; BIND; biomolecular interaction network database; BLAST; basic local alignment search tool; CAMPASS; Cambridge database