Allosteric regulation of the Plasmodium falciparum cysteine protease falcipain-2 by heme
Keywords: آلوستری; Falcipain; Heme; Ferriprotoporphyrin IX; Allostery; Malaria
مقالات ISI آلوستری (ترجمه نشده)
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Local elastic constants of LacI and implications for allostery
Keywords: آلوستری; 00-01; 99-00; Allostery; Mechanical properties; Elastic network model; Stiffness; Lac repressor protein;
Novobiocin and peptide analogs of α-factor are positive allosteric modulators of the yeast G protein-coupled receptor Ste2p
Keywords: آلوستری; G protein-coupled receptor (GPCR); Ste2p; Yeast; Novobiocin; Allostery; DOPA;
Structural basis for cooperative binding of azoles to CYP2E1 as interpreted through guided molecular dynamics simulations
Keywords: آلوستری; Cytochrome P450; Allostery; Azole; Molecular dynamics; Docking; Structure activity relationships
Dynamics, flexibility, and allostery in molecular chaperonins
Keywords: آلوستری; Chaperonin; Chaperone; Protein folding; Allostery; Conformational changes; Protein dynamics;
Dynamics differentiate between active and inactive inteins
Keywords: آلوستری; Mini-intein; Protein splicing; Enzyme dynamics; Allostery; Conformational dynamics; Non-linear Arrhenius plot
Envisioning the dynamics and flexibility of Mre11-Rad50-Nbs1 complex to decipher its roles in DNA replication and repair
Keywords: آلوستری; Mre11-Rad50-Nbs1; CtIP; Allostery; Double strand break repair; Dynamics; Conformational change; AFM; atomic force microscopy; ATM; ataxia telangiectasia mutated; ATR; ataxia telangiectasia and Rad3-related protein; BRCT; BRCA1 C-terminus domain; DSB; DNA
Long-Range Energetic Changes Triggered by a Proline Switch in the Signal Adapter Protein c-CrkII
Keywords: آلوستری; c-CrkII; prolyl isomerization; protein folding; protein–ligand interaction; allostery
Dynamics-Driven Allostery in Protein Kinases
Keywords: آلوستری; protein kinases; allostery; protein dynamics; community analysis
Statistical allosteric coupling to the active site indole ring flip equilibria in the FK506-binding domain
Keywords: آلوستری; PDB; protein data bank; FKBP; FK506 binding protein; NOESY; nuclear Overhauser enhancement spectroscopy; FKBP12; NMR; Allostery; Molecular simulation; Statistical coupling; Concerted transition;
Two surfaces of cytochrome b5 with major and minor contributions to CYP3A4-catalyzed steroid and nifedipine oxygenation chemistries
Keywords: آلوستری; Cytochrome b5; Testosterone; CYP3A4; Allostery; Cytochrome P450; Drug oxidation
Emerging concepts in the regulation of the EGF receptor and other receptor tyrosine kinases
Keywords: آلوستری; receptor tyrosine kinases; epidermal growth factor receptor; signal transduction; allostery
The role of surface electrostatics on the stability, function and regulation of human cystathionine β-synthase, a complex multidomain and oligomeric protein
Keywords: آلوستری; RD; regulatory domain; CD; catalytic domain; DSC; differential scanning calorimetry; ITC; isothermal titration calorimetry; hCBS; human cystathionine beta-synthase; HCU; classical homocystinuria; TS; transition-state of the rate-limiting denaturation step
Regulation of phenylalanine hydroxylase: Conformational changes upon phosphorylation detected by H/D exchange and mass spectrometry
Keywords: آلوستری; Phenylalanine hydroxylase; Phosphorylation; Regulation; Hydrogen-deuterium exchange; Allostery; Structure;
Computer modeling of the dynamic properties of the cAMP-dependent protein kinase catalytic subunit
Keywords: آلوستری; Molecular dynamics; cAMP-dependent protein kinase; Clustering of conformations; Ligand binding; Allostery;
Michaelis and Menten and the long road to the discovery of cooperativity
Keywords: آلوستری; Michaelis-Menten; Cooperativity; Feedback; Allostery;
The allosteric modulation of thyroxine-binding globulin affinity is entropy driven
Keywords: آلوستری; Serpin family; Thyroxine-binding globulin; Allostery; Conformational entropy; Generalized Born surface analysis; Molecular dynamics;
Structure of pyrazole derivatives impact their affinity, stoichiometry, and cooperative interactions for CYP2E1 complexes
Keywords: آلوستری; Cytochrome P450; CYP2E1; Allostery; Cooperativity; Azole; Structure-function;
The switch helix: A putative combinatorial relay for interprotomer communication in cGMP-dependent protein kinase
Keywords: آلوستری; PKG; cGMP; Allostery; Crystal structure; cAMP; Quaternary structure
Allostery and the lac Operon
Keywords: آلوستری; allostery; gene regulation; lac operon
Colocalization of Fast and Slow Timescale Dynamics in the Allosteric Signaling Protein CheY
Keywords: آلوستری; RR, response regulator; CPMG, Carr–Purcell–Meiboom–Gill; NOE, nuclear Overhauser enhancementNMR; allostery; side-chain dynamics; CPMG relaxation dispersion; response regulator
Toward an understanding of the sequence and structural basis of allosteric proteins
Keywords: آلوستری; Allostery; Allosteric protein; Allosteric site; Orthosteric site
Communication between the active site and the allosteric site in class A beta-lactamases
Keywords: آلوستری; BLIP, beta-lactamase inhibitor protein; MD, molecular dynamics; MSF, mean square fluctuations; RMSD, root mean square deviation; VMD, visual molecular dynamicsBeta-lactamase; Ligand binding; Molecular dynamics simulations; Binding free energy; Allostery
Emerging computational approaches for the study of protein allostery
Keywords: آلوستری; Allostery; Simulation; Molecular dynamics; Conformational dynamics
Symmetry distortion in the human hemoglobin tetramer induced by asymmetric ligation
Keywords: آلوستری; Symmetry; Hemoglobin; Allostery; Allosteric model; 4,4′-DithiodipyridineMWC, Monod–Wyman–Changeux; 4-PDS, 4,4′-dithiodipyridine; p-MB, p-hydroxymercuribenzoate; XLHb, human hemoglobin cross-linked between two β82Lys residues by a fumaryl group, where XL d
The link between restriction endonuclease fidelity and oligomeric state: A study with Bse634I
Keywords: آلوستری; REase; restriction endonuclease; wt; wild-type; SC; supercoiled; OC; open-circular; FLL; full-length linear; FI; fidelity index; BSA; bovine serum albumin; DTT; dithiothreitol; Tris; tris(hydroxymethyl)aminomethane; EDTA; ethylenediaminetetraacetic acid;
Kinetic properties and small-molecule inhibition of human myosin-6
Keywords: آلوستری; Actin myosin; Kinetics; Inhibition; Allostery;
The many faces of aspartate kinases
Keywords: آلوستری; Aspartate kinase; ACT domain; Control; Allostery; Structure; Metabolism;
Allosteric regulation of phenylalanine hydroxylase
Keywords: آلوستری; Phenylalanine hydroxylase; Allostery; Regulation; Phosphorylation; Tetrahydrobiopterin
Ultrafast protein dynamics of hemoglobin as studied by picosecond time-resolved resonance Raman spectroscopy
Keywords: آلوستری; Time-resolved spectroscopy; Resonance Raman spectroscopy; Hemoglobin; Protein dynamics; Allostery;
Allosteric post-translational modification codes
Keywords: آلوستری; allostery; propagation; signaling proteins; conformational ensembles; signaling pathways; protein structure; population shift; conformational selection; induced fit
NMR insights into protein allostery
Keywords: آلوستری; Solution NMR; Dynamics; Allostery; Conformational changes; Relaxation dispersion; Silent allostery
Allostery and the dynamic oligomerization of porphobilinogen synthase
Keywords: آلوستری; Porphobilinogen synthase; Quaternary structure; Protein structure dynamics; Allostery; Morpheein
The structure and allosteric regulation of mammalian glutamate dehydrogenase
Keywords: آلوستری; Glutamate dehydrogenase; Insulin regulation; Polyphenols; Allostery; Subunit communication; Protein dynamics
Allosteric regulation of substrate channeling and catalysis in the tryptophan synthase bienzyme complex
Keywords: آلوستری; Allostery; Substrate channeling; Tryptophan synthase
Dynamic dissociating homo-oligomers and the control of protein function
Keywords: آلوستری; Allostery; Protein multimer; Morpheein; Moonlighting
Human serum albumin: From bench to bedside
Keywords: آلوستری; Human serum albumin; Genetic variants; Recombinant human serum albumin; Structure; Chemical modifications; Ligand binding properties; Human serum heme–albumin; (Pseudo-)enzymatic properties; Allostery; Biomedical aspects; Biotechnological applicationsAFM,
Acylideneoxoindoles: A new class of reversible inhibitors of human transglutaminase 2
Keywords: آلوستری; Transglutaminase 2; Oxoindole; Celiac sprue; Structure–activity relationships; Allostery
Cardiolipin modulates allosterically peroxynitrite detoxification by horse heart cytochrome c
Keywords: آلوستری; CL; cardiolipin; CL-cytc-Fe(III); cardiolipin-ferric cytochrome c complex; cytc-Fe(III); ferric cytochrome c; HSA-heme-Fe(III); ferric HSA-heme; Horse heart cytochrome c; Cardiolipin; Peroxynitrite isomerization; Allostery;
Ibuprofen and warfarin modulate allosterically ferrous human serum heme-albumin nitrosylation
Keywords: آلوستری; FA; fatty acid; heme-Fe(III); ferric heme; HSA; human serum albumin; HSA-heme-Fe; Heme-albumin; HSA-heme-Fe(II); ferrous HSA-heme-Fe; HSA-heme-Fe(II)-NO; ferrous nitrosylated HSA-heme-Fe; Ferrous human serum heme-albumin; Ibuprofen
Allostery in the lac operon: Population selection or induced dissociation?
Keywords: آلوستری; Allostery; Lac repressor; Induced fit; Population selection; Kinetics of allostery; Tertiary capture;
The 1.6Â Ã
resolution structure of activated D138L mutant of catabolite gene activator protein with two cAMP bound in each monomer
Keywords: آلوستری; Catabolite gene activator protein (CAP); Cyclic AMP (cAMP); Transcription; Allostery; X-ray crystallography;
Modulation of allosteric behavior through adjustment of the differential stability of the two interacting domains in E. coli cAMP receptor protein
Keywords: آلوستری; Allostery; Protein stability and dynamics; FT-IR; cAMP receptor protein;
Co(II)-substituted Haemophilus influenzae β-carbonic anhydrase: Spectral evidence for allosteric regulation by pH and bicarbonate ion
Keywords: آلوستری; β-Carbonic anhydrase; Haemophilus influenzae; Bicarbonate; Metalloenzyme; Cobalt substitution; Allostery
Rigidification of the autolysis loop enhances Na+ binding to thrombin
Keywords: آلوستری; Thrombin; Na+ binding; Allostery; X-ray crystallography;
Steric factors moderate conformational fluidity and contribute to the high proton sensitivity of Root effect hemoglobins
Keywords: آلوستری; Hemoglobin; Root effect; Conformational fluidity; Redox potential; Allostery; Steric controls
T-quaternary structure of oxy human adult hemoglobin in the presence of two allosteric effectors, L35 and IHP
Keywords: آلوستری; Hemoglobin; Cooperativity; Allostery; NMR; Allosteric effectors; Quaternary structure
Cooperativity and allostery in cAMP-dependent activation of Protein Kinase A: Monitoring conformations of intermediates by amide hydrogen/deuterium exchange
Keywords: آلوستری; BME; β-mercaptoethanol; cAMP; cyclic 3â²5â²adenosine monophosphate, C, catalytic subunit of cAMP-dependent protein kinase; R; regulatory subunit of cAMP-dependent protein kinase; PKA; cAMP-dependent protein kinase, Protein Kinase A; RIα(92-379); del
3D structure and allosteric modulation of the transmembrane domain of pentameric ligand-gated ion channels
Keywords: آلوستری; Nicotinic ACh receptor; GABAA receptor; Glycine receptor; Lipids; Allostery; Membrane protein; X-ray structure
Alternative Allosteric Mechanisms Can Regulate the Substrate and E2 in SUMO Conjugation
Keywords: آلوستری; MSF, mean-square fluctuations; SUMO, small ubiquitin-like modifier; Ubl, ubiquitin; SIM, SUMO interaction motifUbc9-RanGAP1; molecular dynamics; allostery; sumoylation cascade; E3-RanBP2