Keywords: جابجایی جایگزین; Gene duplication; Alternative splicing; Transposon; Genome duplication;
مقالات ISI جابجایی جایگزین (ترجمه نشده)
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Expression and function of lncRNA MALAT-1 in the embryonic development of zebrafish
Keywords: جابجایی جایگزین; AS; alternative splicing; B-MYB; Myb-related protein B; Egr1; early growth response 1; hpf; hour post-fertilization; lncRNA; long non-coding RNA; MALAT-1; metastasis-associated lung adenocarcinoma transcript 1; mascRNA; MALAT-1-associated small cytoplasmi
The alternatively spliced porcine FcγRI regulated PRRSV-ADE infection and proinflammatory cytokine production
Keywords: جابجایی جایگزین; Porcine; FcγRI; Alternative splicing; PRRSV; ADE; Inflammation;
A novel heme oxygenase-1 splice variant, 14kDa HO-1, promotes cell proliferation and increases relative telomere length
Keywords: جابجایی جایگزین; HO-1; Alternative splicing; 14Â kDa HO-1; Telomere length; Cell proliferation;
Aberrant alternative splicing of RHOA is associated with loss of its expression and activity in diffuse-type gastric carcinoma cells
Keywords: جابجایی جایگزین; RhoA; Rho family small GTPase; Alternative splicing; Gastric carcinoma; Diffuse-type; Pulldown assay;
The plethora of PMCA isoforms: Alternative splicing and differential expression
Keywords: جابجایی جایگزین; PMCA; Plasma membrane calcium ATPase; Alternative splicing; Spliced isoform;
Histone and RNA-binding protein interaction creates crosstalk network for regulation of alternative splicing
Keywords: جابجایی جایگزین; Rbfox; Histone protein; Alternative splicing; Histone modification; Crosstalk;
Regulation of Tak1 alternative splicing by splice-switching oligonucleotides
Keywords: جابجایی جایگزین; Splice-switching oligonucleotides; Vivo-morpholino; Tak1; Isoform function; Lipid metabolism; 2OMePS; 2â²-O-methyl phosphorothioate; ALS; amyotrophic lateral sclerosis; AONs; Antisense oligonucleotides; AS; Alternative splicing; HFD; High-fat diet; NMD;
Adipose-specific expression of mouse Rbp7 gene and its developmental and metabolic changes
Keywords: جابجایی جایگزین; Rbp7; Retinol binding protein 7; RT-PCR; Reverse transcription polymerase chain reaction; BAT; Brown adipose tissue; iWAT; Inguinal white adipose tissue; Gls2; Glutaminase 2; TICs; Transcription-induced chimeras; Crbp-III; Cellular retinol-binding protein
Isolation and characterization of porcine PILRB gene and its alternative splicing variants
Keywords: جابجایی جایگزین; AS; alternative splicing; cDNA; complementary DNA; CDS; coding sequence; CHX; cycloheximide; NMD; nonsense-mediated mRNA decay; PCR; polymerase chain reaction; PILR; paired immunoglobulin-like type 2 receptor; PTC; premature termination codon; qPCR; quant
SpliceVec: Distributed feature representations for splice junction prediction
Keywords: جابجایی جایگزین; AS; alternative splicing; CNN; convolutional neural network; t-SNE; stochastic neighbor embedding; MLP; multilayer perceptron; nt; nucleotides; bp; base pairs; NLP; natural language processing; CBOW; continuous bag of words; DBOW; distributed bag of words
The PBII gene of the human salivary proline-rich protein P-B produces another protein, Q504X8, with an opiorphin homolog, QRGPR
Keywords: جابجایی جایگزین; N-; amino; C-; carboxyl; Opiorphin; Human salivary proline-rich protein P-B; Variant protein Q504X8; PBII gene; Alternative splicing; Non-canonical splice site;
Analysis of alternative splicing events by RNA sequencing in the ovaries of Xiang pig at estrous and diestrous
Keywords: جابجایی جایگزین; Ovary; RNA-Sequencing; Transcripts; Alternative splicing; Xiang pig;
Methylmercury exposure alters RNA splicing in human neuroblastoma SK-N-SH cells: Implications from proteomic and post-transcriptional responses
Keywords: جابجایی جایگزین; Methylmercury; Mercury chloride; Differentially expressed proteins; Alternative splicing; SK-N-SH cells;
Autoregulation of the human splice factor kinase CLK1 through exon skipping and intron retention
Keywords: جابجایی جایگزین; ESE; exonic splice enhancer; ISS; intronic splice silencer; CDC-like protein kinases; CLK1; Alternative splicing; Cassette exons; Intron retention; Detained introns; CLK1 inhibitor TG003; Harmine;
Alternative RNA splicing associated with axon regeneration after rat peripheral nerve injury
Keywords: جابجایی جایگزین; Peripheral nerve injury; Axon regeneration; Dorsal root ganglia; Alternative splicing; Nrcam;
The matrices and constraints of GT/AG splice sites of more than 1000 species/lineages
Keywords: جابجایی جایگزین; RNA; ribonucleic acid; SS; splice site; Splice sites; Intron; Diversity; Alternative splicing;
Characterization of two splice variants of EGFR and their effects on the growth of the razor clam
Keywords: جابجایی جایگزین; Sinonovacula constricta; EGFR; Alternative splicing; Cell proliferation;
17β-estradiol regulates the RNA-binding protein Nova1, which then regulates the alternative splicing of estrogen receptor β in the aging female rat brain
Keywords: جابجایی جایگزین; Estrogen receptor β; Alternative splicing; Aging; Brain; Nova1;
Pig StAR: mRNA expression and alternative splicing in testis and Leydig cells, and association analyses with testicular morphology traits
Keywords: جابجایی جایگزین; Pig; Steroidogenic acute regulatory protein (StAR); Alternative splicing; Genetic variants; Reproductive traits; LCs; Leydig cells; SSCs; spermatogonial stem cells; CYP11A1; cytochrome P450 family 11 subfamily A member 1; HSD3B; 3β-hydroxysteroid dehydro
Identification and characterization of two novel alternatively spliced E2F1 transcripts in the rat CNS
Keywords: جابجایی جایگزین; CNS; central nervous system; NPAS3; neuronal per-arnt-sim domain protein 3; NMD; nonsense-mediated mRNA decay; PTBP; polypyrimidine tract binding proteins; PSD-95; postsynaptic density-95; TDP-43; TAR DNA-binding protein-43; qPCR; quantitative real-time P
RBM4a modulates the impact of PRDM16 on development of brown adipocytes through an alternative splicing mechanism
Keywords: جابجایی جایگزین; Alternative splicing; Brown adipocyte; PRDM16; RBM4a;
Global profiling of Rbm24 bound RNAs uncovers a multi-tasking RNA binding protein
Keywords: جابجایی جایگزین; RNA binding protein; Rbm24; RIP-Chip; Alternative splicing; Cardiomyocyte;
SRSF5 functions as a novel oncogenic splicing factor and is upregulated by oncogene SRSF3 in oral squamous cell carcinoma
Keywords: جابجایی جایگزین; SRSF5; SRSF3; Oncogene; Autoregulation; Alternative splicing;
Multi-posttranscriptional regulations lessen the repressive effect of SRPK1 on brown adipogenesis
Keywords: جابجایی جایگزین; Alternative splicing; Brown adipocyte; miR-485; RBM4; SRPK1;
A Systems-Level Analysis Reveals Circadian Regulation of Splicing in Colorectal Cancer
Keywords: جابجایی جایگزین; Circadian clock; Colorectal cancer progression; Spliceosome; Splicing factors; Alternative splicing; Differential rhythmicity;
RBM4-SRSF3-MAP4K4 splicing cascade modulates the metastatic signature of colorectal cancer cell
Keywords: جابجایی جایگزین; Alternative splicing; Colorectal cancer; MAP4K4; RBM4; SRSF3;
A potent tilapia secreted granulin peptide enhances the survival of transgenic zebrafish infected by Vibrio vulnificus via modulation of innate immunity
Keywords: جابجایی جایگزین; Tilapia; Progranulin; Granulin; Innate immunity; Vibrio; Transgenic zebrafish; Alternative splicing;
The posterior pituitary expresses the serotonin receptor 2C
Keywords: جابجایی جایگزین; Serotonin receptor 2C; Pituitary; Alternative splicing; Prader-Willi syndrome;
Elavl3 regulates neuronal polarity through the alternative splicing of an embryo-specific exon in AnkyrinG
Keywords: جابجایی جایگزین; Axon initial segment; AnkyrinG; Elavl3; Alternative splicing; Neuronal polarity; RNA binding protein;
Identification of a novel porcine OASL variant exhibiting antiviral activity
Keywords: جابجایی جایگزین; JEV; Japanese encephalitis virus; IFNs; interferons; ISGs; IFN-stimulated genes; OAS; 2',5'-oligoadenylate synthetase; PRRs; pattern-recognition receptors; RNase L; ribonuclease L; RIG-I; retinoic acid-inducible gene I; MDA5; melanoma differentiation-
Identification of the splice variants of Recepteur d'Origine nantais (RON) in lung cancer cell lines
Keywords: جابجایی جایگزین; cDNA; complimentary deoxyribonucleic acid; EST; Express sequence tag; mRNA; Messenger ribonucleic acid; MSP; Macrophage stimulating protein; MST1R; Macrophage-stimulating 1 receptor; NCBI; National Center for Biotechnology Information; NMD; Non-sense medi
Context-dependent functions of KLF4 in cancers: Could alternative splicing isoforms be the key?
Keywords: جابجایی جایگزین; KLF4; Alternative splicing; Context-dependent function; Cancer;
Cloning and expression study of an IRF4a gene and its two transcript variants in turbot, Scophthalmus maximus
Keywords: جابجایی جایگزین; IRF4a; Scophthalmus maximus; Alternative splicing; Gene expression; Antiviral response;
CircRNA accumulation: A new hallmark of aging?
Keywords: جابجایی جایگزین; circRNA; circular RNA; FACS; fluorescence-activated cell sorting; FDR; false discovery rate; NGS; next-generation sequencing; RPAD; RNase R treatment followed by polyadenylation and poly(A)+ RNA depletion; RBP; RNA-binding protein; RCM; Reverse complement
Analysis of two transcript isoforms of vacuolar ATPase subunit H in mouse and zebrafish
Keywords: جابجایی جایگزین; V-ATPase; vacuolar ATPase; ATP6V1H; subunit H of vacuolar ATPase; SFD; sub fifty-eight-kDa dimer, or doublet; V-ATPase; Osteoclasts; ATP6V1H; Isoform; Alternative splicing; Zebrafish;
Characterization of expression and alternative splicing of the gene cadherin-like and PC esterase domain containing 1 (Cped1)
Keywords: جابجایی جایگزین; Cped1; cadherin-like and PC esterase domain containing; GWAS; genome-wide association study; BMD; bone mineral density; ORF; open-reading frame; Bp; base pair(s); Aa; amino acid; B6; C57BL/6J; WBC(s); white blood cell(s); RT-PCR; reverse-transcriptase pol
Regulation of splicing and circularisation of RNA in epithelial mesenchymal plasticity
Keywords: جابجایی جایگزین; AS; alternative splicing; circular RNA; circRNA; EMT; epithelial mesenchymal transition; ES cell; embryonic stem cell iPSC induced pluripotent stem cell; MET; mesenchymal epithelial transition; RBP; RNA binding protein; Epithelial-mesenchymal transition;
DA-Raf, a dominant-negative antagonist of the Ras-ERK pathway, is a putative tumor suppressor
Keywords: جابجایی جایگزین; Ras-ERK pathway; Raf; Alternative splicing; Transformation; Tumorigenesis; Tumor suppressor;
Differentially expressed novel alternatively spliced transcript variant of tumor suppressor Stk11 gene in mouse
Keywords: جابجایی جایگزین; STK11; Serine/threonine kinase 11; AMPK; Adenine monophosphate-activated protein kinase; Lkb1; Liver kinase b1; PJS; Peutz-Jeghers syndrome; STRAD; STe20-related adaptor protein; MO25; Mouse adaptor protein 25; NSCLC; Non-small cell lung cancer; IAEC; Ins
The splicing code
Keywords: جابجایی جایگزین; Splicing code; Alternative splicing; Aplicing regulators; RNA binding proteins; Splicing regulatory elements;
Multi-step splicing of sphingomyelin synthase linear and circular RNAs
Keywords: جابجایی جایگزین; bp; base pair(s); DNase; deoxyribonuclease; dNTP; deoxyribonucleoside triphosphate; cDNA; DNA complementary to RNA; circRNA; circular RNA; Ct; threshold cycle; GAPDH; glyceraldehyde 3-phosphate dehydrogenase gene; kb; kilobase(s) or 1000â¯bp; LDHA; lacta
Transcriptional profiling of murine osteoblast differentiation based on RNA-seq expression analyses
Keywords: جابجایی جایگزین; Bone cells; RNAseq; Non-coding RNA; Topological domains; Alternative splicing;
Biology and clinical relevance of noncoding sno/scaRNAs
Keywords: جابجایی جایگزین; Noncoding RNA; Small Cajal body-associated RNA; Spliceosomal RNA; Small nucleolar RNA; Alternative splicing; AGO; argonaute; CLL; chronic lymphocytic leukemia (CLL); CB; Cajal body; CTD; carboxyl-terminal domain; DC; Dyskeratosis congenital; DKC1; Dyskera
Goat CTNNB1: mRNA expression profile of alternative splicing in testis and association analysis with litter size
Keywords: جابجایی جایگزین; CTNNB1; Catenin beta 1; FSHR; follicle-stimulating hormone receptor; WGBS; whole-genome bisulfite sequencing; SRY; sex-determining region Y; AS; alternative Splicing; SNP; single nucleotide polymorphism; indel; insertion/deletion; SV; structural variation
Molecular cloning of novel transcripts of the adaptor-related protein complex 2 alpha 1 subunit (AP2A1) gene, using Next-Generation Sequencing
Keywords: جابجایی جایگزین; AP; adaptor-related protein; AP2A1; adaptor-related protein complex 2 alpha 1 subunit; IGV; Integrative Genomics Viewer; ISP; Ion Sphere⢠Particle; NGS; Next-Generation Sequencing; NMD; nonsense-mediated mRNA decay; PCR; polymerase chain reaction; PTC;
Alternative splicing of GnRH2 and GnRH2-associated peptide plays roles in gonadal differentiation of the rice field eel, Monopterus albus
Keywords: جابجایی جایگزین; GnRH2; GnRH2-associated peptide; Alternative splicing; Gonadal differentiation; Rice field eel;
Discovery and expression analysis of novel transcripts of the human SR-related CTD-associated factor 1 (SCAF1) gene in human cancer cells using Next-Generation Sequencing
Keywords: جابجایی جایگزین; cDNA; complementary DNA; CTD; C-terminal domain; DFS; disease-free survival; IGV; Integrative Genomics Viewer; ISPs; Ion Sphere⢠Particles; NGS; Next-Generation Sequencing; ncRNAs; non-coding RNAs; NMD; non-sense-mediated mRNA decay; ORF; open reading f
Identification of two isoforms of Pop in the domestic silkworm, Bombyx mori: Cloning, characterization and expression analysis
Keywords: جابجایی جایگزین; Aph; acylpeptide hydrolase; AA; alternative acceptor site; AD; alternative donor site; AS; alternative splicing; ANCE; angiotensin-converting enzyme; Ang I; angiotensin I; B. mori; Bombyx mori; BSA; bovin serum albumin; DTT; dithiothreitol; E. coli; Esche
Transcriptome profiling using Illumina- and SMRT-based RNA-seq of hot pepper for in-depth understanding of genes involved in CMV infection
Keywords: جابجایی جایگزین; AS; alternative splicing; BRs; brassinosteroids; CMS; cytoplasmic male sterility; CMV; Cucumber mosaic virus; DEGs; differentially expressed genes; DGE; digital gene expression profiling; FDH; Formate dehydrogenase; FPKM; fragments per kilobase of transcr