Keywords: متفاوت بیان شده است; Pharmacogenomics; gene expression; inhaled corticosteroids; apoptosis; system biology; CAMP; Childhood Asthma Management Program; DC; Differentially connected; DE; Differentially expressed; FEV1%; FEV1 percent of predicted; ICS; Inhaled corticosteroid; LC
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Keywords: متفاوت بیان شده است; Ovary; High-fat diet; Obesity; Female fertility; RNA sequencing; Transcription factor 3; Atf3; A disintegrin-like and metallopeptidase with thrombospondin type 1 motif, 1; Adamts1; Activating Anti-mullerian hormone; AMH; B cell translocation gene 2; Btg2;
Keywords: متفاوت بیان شده است; DE; differentially expressed; LFC; log2 fold change; AEC; airway epithelial cell; ROC; receiver operating characteristic; SVM; support vector machine; GEO; gene expression omnibus; RMA; robust multichip average; FDR; false discovery rate; GO; gene ontolog
Keywords: متفاوت بیان شده است; Childhood asthma; asthma phenotypes; gene expression profiling; microarray analysis; longitudinal study; ADD3; Adducin 3 (gamma); CAMP; Childhood Asthma Management Program; DE; Differentially expressed; FDR; False discovery rate; GR; Glucocorticoid recept
Keywords: متفاوت بیان شده است; MI; myocardial infarction; LV; left ventricle; EX; exercise-training; SED; sedentary; TFBS; transcription factor binding site; GR; glucocorticoid receptor; FDR; false discovery rate; DE; differentially expressed; Cardiac hypertrophy; Physiological hypertr
Keywords: متفاوت بیان شده است; Breast cancer; Distant metastasis; Gene expression profiles; IFN-metagene; Breast cancer subtypes; BC; breast cancer; ER; estrogen receptor; DE; differentially expressed; INTM; Istituto Nazionale Tumori of Milan; LI; lymphocyte infiltration; IQR; interqua
Keywords: متفاوت بیان شده است; DE; differentially expressed; PPI; protein-protein interaction; SAM; significance analysis of microarray; FDR; false discovery rate; POD; percentage of overlapping deregulations; PO; percentage of overlap; PON; percentage of overlap in the PPI network;
SigEMD: A powerful method for differential gene expression analysis in single-cell RNA sequencing data
Keywords: متفاوت بیان شده است; scRNAseq; single cell RNA sequencing; NGS; next generation sequencing; RNAseq; RNA sequencing; DE; differentially expressed; EMD; Earth Mover's Distance; NB; negative binomial; DU; differential unimodal; DM; differential modality; DP; differential propo
Necroptosis in 3-chloro-1, 2-propanediol (3-MCPD)-dipalmitate-induced acute kidney injury in vivo and its repression by miR-223-3p
Keywords: متفاوت بیان شده است; 3-MCPD; 3-chloro-1,2-propanediol; 3â²UTR; 3â² un-translated region; AKI; acute kidney injury; BMD10; Benchmark doses; BMDL10; BMD Lower Confidence Limit; BW; body weight; CXCl; chemokine (C-X-C motif) ligand; DE; differentially expressed; DR6; death rec
Gene expression analysis of Ruditapes philippinarum haemocytes after experimental Perkinsus olseni zoospore challenge and infection in the wild
Keywords: متفاوت بیان شده است; Manila clam; Perkinsosis; Oligo-microarray; Immune response; Host-parasite interaction; A2ML1; Alpha-2-macroglobulin; ABL1; Tyrosine-protein kinase abl1; ACTA2; Alpha-2 actin; ACTB; Beta-actin; ALG1; Chitobiosyldiphosphodolichol beta-mannosyltransferase;
Genome-wide profiling of gene expression and DNA methylation provides insight into low-altitude acclimation in Tibetan pigs
Keywords: متفاوت بیان شده است; LincRNA; long intergenic noncoding RNAs; BS-seq; bisulfite sequencing; RIN; RNA integrity number; GEO; Gene Expression Omnibus; CPC; Coding Potential Calculator; Bin; binomial; ML; methylation level; P; proximal; I; intermediate; D; distal; GO; Gene Ontol
Genome-wide gene expression analysis of 45â¯days pregnant fetal cotyledons vis-a-vis non-pregnant caruncles in buffalo (Bubalus bubalis)
Keywords: متفاوت بیان شده است; ART; assisted reproductive technologies; IFNT; interferon tau; OXTR; oxytocin receptors; TE; trophectoderm; CL; corpus luteum; PRP1; proline-rich protein BstNI; TKDP4; Trophoblast Kunitz domain protein 4; C-R length; crown to rump length; GEO; Gene Expres
Comprehensive and in-depth analysis of microRNA and mRNA expression profile in salivary adenoid cystic carcinoma
Keywords: متفاوت بیان شده است; SACC; salivary adenoid cystic carcinoma; 3â²-UTR; 3â²-untranslated region; DE; differentially expressed; GO; Gene ontology; Q-PCR; Quantitative real-time PCR; SCUBE3; signal peptide, CUB domain and EGF like domain containing 3; CA6; carbonic anhydrase 6
Transcriptome signature of liver tissue with divergent mutton odour and flavour using RNA deep sequencing
Keywords: متفاوت بیان شده است; MOF; mutton odour and flavour; BCFA; Branched chain fatty acid; MNA; methylnonanoic; MP; phenol, 3-methyl; MNA; 4-methylnonanoic; EOA; 4-ethyloctanoic; MI; 3-methylindole or skatole; DEGs; differentially expressed; GC-MS; gas-chromatography/mass spectro
Identification and characterization of microRNAs in the liver of rainbow trout in response to heat stress by high-throughput sequencing
Keywords: متفاوت بیان شده است; HSP; heat-shock protein; DE; differentially expressed; RT-qPCR; quantitative real-time PCR; Oncorhynchus mykiss; Temperature stress; miRNA;
The expression of oxidative stress response genes is modulated by a combination of resveratrol and N-acetylcysteine to ameliorate ototoxicity in the rat cochlea
Keywords: متفاوت بیان شده است; Antioxidant therapy; Gpx1; Il1b; Il4; PCR-arrays; Sod1; ABR; Auditory Brainstem Responses; AGs; Aminoglycosides; COX-2; cyclooxygenase 2; DE; Differentially expressed; FC; Fold change; IHC; Inner hair cells; IP; intraperitoneal; IPL; Interpeak latency; NA
Abnormalities in Prefrontal Cortical Gene Expression Profiles Relevant to Schizophrenia in MK-801-Exposed C57BL/6 Mice
Keywords: متفاوت بیان شده است; DE; differentially expressed; ETC; electron transport chain; FC; fold change; NMDAR; NMDA receptor; NOR; novel object recognition; PFC; prefrontal cortex; PPI; prepulse inhibition; RNA; seq-RNA-sequencing; SCZ; schizophrenia; RNA-seq; biclustering; synaps
Comparative analysis of RNA-Seq data from brain and blood samples of Parkinson's disease
Keywords: متفاوت بیان شده است; Parkinson's disease; RNA-Seq data; miR Co-expression network; Pathway analysis; SM2miR drugs; PD; Parkinson's Disease; miR; MicroRNA; RNA-Seq; RNA sequencing; DE; Differentially Expressed; Hclust; Hierarchical Clustering; ATC; Anatomic Therapeutic Classif
Microarray data and gene expression statistics for Saccharomyces cerevisiae exposed to simulated asbestos mine drainage
Keywords: متفاوت بیان شده است; VAG; Vermont Asbestos Group; others throughout this manuscript include BAP; biotinylated anti-phycoerytherin antibody; DE; differentially expressed; FDR; false discovery rate; NCBI GEO; National Center for Biotechnology Information Gene Expression Omnibus
Whole transcriptome expression of trigeminal ganglia compared to dorsal root ganglia in Rattus Norvegicus
Keywords: متفاوت بیان شده است; DE; differentially expressed; DRG; dorsal root ganglia; GPCRs; G-protein-coupled receptors; MOs; myelinating oligodendrocytes; OPCs; oligodendrocyte precursor cells; SGCs; satellite glial cells; TG; trigeminal ganglia; RNA-Sequencing; sensory neurons; spi
Differential expression profile of miRNAs in porcine muscle and adipose tissue during development
Keywords: متفاوت بیان شده است; DE; differentially expressed; 3â²-UTR; 3â²-untranslated region; SRF; serum response factor; MyoD; myogenic differentiation; MHC-α; α-myosin heavy chain; MHC-β; β-myosin heavy chain; Myh7b; myosin heavy chain 7b; BMP2; bone morphogenetic protein 2; M
Comparative analysis of osteoblast gene expression profiles and Runx2 genomic occupancy of mouse and human osteoblasts in vitro
Keywords: متفاوت بیان شده است; NGS; next generation sequencing; ChIP; chromatin immunoprecipitation; ChIP-seq; chromatin immunoprecipitation followed by deep sequencing; TF; transcription factor; MSC; mesenchymal stem cell; DE; differentially expressed; TSS; transcriptional start site;
Landscape of Long Noncoding RNAs in Psoriatic and Healthy Skin
Keywords: متفاوت بیان شده است; CNC; coding noncoding; DE; differentially expressed; FPKM; fragments per kilobase per million reads mapped; lncRNA; long noncoding RNA; NN; normal skin from healthy controls; PP; psoriatic plaque skin before treatment; PT; psoriatic plaque skin post-treat
The unexpected extremophile: Tolerance to fluctuating salinity in the green alga Picochlorum
Keywords: متفاوت بیان شده است; HGT; horizontal gene transfer; DE; differentially expressed; ASW; artificial seawater; FRRF; fast repetition rate fluorometer; STF; single turnover flash; PSII; photosystem II; WOC; water-oxidizing complex; QF; quality factor; FDR; false discovery rate; L
Identification of microRNA-mRNA dysregulations in paroxysmal atrial fibrillation
Keywords: متفاوت بیان شده است; AF; Atrial fibrillation; cAF; Chronic atrial fibrillation; DE; Differentially expressed; miRNA; microRNA; pAF; Paroxysmal atrial fibrillation; qRT-PCR; Quantitative real-time polymerase chain reaction; RNA-Seq; RNA sequencing; SR; Sinus rhythm; microRNA;
RNA-Seq SSRs and small RNA-Seq SSRs: New approaches in cancer biomarker discovery
Keywords: متفاوت بیان شده است; BPC; Benign pancreatic cancer; CNVs; Copy number variations; DE; Differentially expressed; ESTs; Expressed sequence tags; ncRNAs; Non-coding RNAs; NGS; Next generation sequencing; PBMCs; Peripheral blood mononuclear cells; PC; Pancreatic cancer; RNA-seq;
MTA1 regulates higher-order chromatin structure and histone H1-chromatin interaction in-vivo
Keywords: متفاوت بیان شده است; MTA1; Chromatin; Histone H1; in-vivo; Nucleosome remodeling and histone deacetylation complex (NuRD); MTA1; metastasis-associated gene 1; NuRD; nucleosome remodeling and histone deacetylase; NRL; nucleosome repeat length; HATs; histone acetyltransferases;
Comparative analysis of microRNAs from the lungs and trachea of dogs (Canis familiaris) infected with canine influenza virus
Keywords: متفاوت بیان شده است; MicroRNA (miRNA); High-throughput sequencing; Differentially expressed; Canine influenza virus (CIV);
Yessotoxin induces ER-stress followed by autophagic cell death in glioma cells mediated by mTOR and BNIP3
Keywords: متفاوت بیان شده است; YTX; yessotoxin; DE; differentially expressed; UPR; unfolded protein response; ER-stress; endoplasmic reticulum stress; mTOR; mechanistic target of rapamycin (serine/threonine kinase); LC3; microtubule-associated protein 1 light chain 3 alpha; BNIP3; BCL2
In vitro microarray analysis identifies genes in acute-phase response pathways that are down-regulated in the liver of chicken embryos exposed in ovo to PFUdA
Keywords: متفاوت بیان شده است; a2m; alpha-2-macroglobulin; APR; acute-phase response; cdo1; cysteine dioxygenase type I; CEH; chicken embryonic hepatocytes; cpb2; carboxypeptidase B2; DE; differentially expressed; DMSO; dimethyl sulfoxide; f2; thrombin (coagulation factor II); FDR; fal
Identification of plant genes involved on the initial contact between ectomycorrhizal symbionts (Castanea sativa – European chestnut and Pisolithus tinctorius)
Keywords: متفاوت بیان شده است; Castanea sativa; cDNA microarray; Differentially expressed; Ectomycorrhiza (ECM); Pisolithus tinctorius
Improving the power to detect differentially expressed genes in comparative microarray experiments by including information from self–self hybridizations
Keywords: متفاوت بیان شده است; Linear models; Self–self hybridizations; Differentially expressed; Gene expressions; Microarray