Keywords: دو رشته; AU; absorbance unit (Chapter 3.1) or arbitrary unit (Figs. 2 and 5); BLM; Bloom's syndrome DNA helicase; bp; base pair; ds; double-stranded; DxSO4; dextran sulfate; FRET; Förster Resonance Energy Transfer; LDH; lactate dehydrogenase; mant; methylanthra
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Development of new versatile plasmid-based systems for λRed-mediated Escherichia coli genome engineering
Keywords: دو رشته; bp; base pair; PCR; polymerase chain reaction; ori; origin of replication; ds; double-stranded; ApR; ampicillin resistant; CmR; chloramphenicol resistant; cat; chloramphenicol acetyltransferase; bla; beta-lactamase; MMR; methyl-directed mismatch repair; C
ADAR1 and PKR, interferon stimulated genes with clashing effects on HIV-1 replication
Keywords: دو رشته; ADAR1; adenosine deaminase acting on RNA 1; AGS; Aicardi-Goutières syndrome; APOBEC3; apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3; ds; double-stranded; dsRBD; dsRNA binding domains; eIF2α; translation initiation factor2; HIV-1; hum
RNA polymerase III initiation on coligo DNA templates containing loops of variable sequence, size and nucleotide chemistry
Keywords: دو رشته; Coligo; circularized oligo; Pol III; RNA polymerase III; ss; single-stranded; ds; double-stranded; FLAG; epitope peptide tag; nt; nucleotides; RACE; rapid amplification of cDNA ends; N; randomized nucleotide (25% each A,C,T,G); Coligo; Transcription; RNA
MiR-525-3p mediates antiviral defense to rotavirus infection by targeting nonstructural protein 1
Keywords: دو رشته; miRNA; microRNA; RV; rotavirus; qRT-PCR; quantitative real-time polymerase chain reaction; UTR; untranslated region; NSP1; nonstructural protein 1; MOI; multiplicity of infection; IFN; interferon; IRF; interferon regulatory factor; dsRNA; double-stranded
Multiple DNA Interactions Contribute to the Initiation of Telomerase Elongation
Keywords: دو رشته; RT; reverse transcriptase; TERT; telomerase catalytic protein subunit; ss; single-stranded; ds; double-stranded; TEN; domain; telomere; DNA-protein interaction; telomerase substrate specificity; repeat addition processivity; Naumovozyma castellii;
Inflammasome signaling pathways exert antiviral effect against Chikungunya virus in human dermal fibroblasts
Keywords: دو رشته; AIM2; absent in melanoma 2; ASC; apoptosis-associated speck-like protein containing a caspase recruitment domain; CHIKV; Chikungunya virus; ds; double-stranded; hpi; hours post infection; ISG; interferon-stimulated gene; MDA5; Melanoma differentiation-ass
In silico prediction and validation of potential gene targets for pospiviroid-derived small RNAs during tomato infection
Keywords: دو رشته; Aa; amino acid; ABSVd; avocado sunblotch viroid; AFCVd; apple fruit crinkle viroid; AGO; argonaute; AGVd; Australian grapevine viroid; ASSVd; apple scar skin viroid; CBVd; Coleus blumei viroid; CBCVd; citrus bark cracking viroid; CBLVd; citrus bent leaf v
Distinct functional consequences of MUTYH variants associated with colorectal cancer: Damaged DNA affinity, glycosylase activity and interaction with PCNA and Hus1
Keywords: دو رشته; 9#3â3#1; Rad9-Hus1-Rad1; araFA; 9-(2-deoxy-2-fluoro-β-d-arabinofuranosyl) adenine; AST; active site titration; bp; base-pair; BER; base excision repair; CRC; colorectal cancer; ds; double-stranded; Ec; Escherichia coli; EMSA; electrophoretic mobili
The DNA-dependent protein kinase: A multifunctional protein kinase with roles in DNA double strand break repair and mitosis
Keywords: دو رشته; DNA-dependent protein kinase; Non-homologous end joining; Mitosis; ATM; ataxia telangiectasia mutated; ATR; ATM- and Rad3-related; ds; double-stranded; cryo-EM; cryo-electron microscopy; DSB; DNA double strand break; DNA-PK; DNA-activated/dependent protei
Crystal structure of the RNA demethylase ALKBH5 from zebrafish
Keywords: دو رشته; m6A; N6-methyladenosine; hm6A; N6-hydroxymethyladenosine; fm6A; N6-formyladenosine; A; adenosine; fALKBH5; zebrafish ALKBH5; α-KG; α-ketoglutarate; m1A; 1-methyladenine; m3C; 3-methylcytosine; ss; single-stranded; ds; double-stranded; cm5U; 5-carboxy-me
Epithelium specific ETS transcription factor, ESE-3, of Protobothrops flavoviridis snake venom gland transactivates the promoters of venom phospholipase A2 isozyme genes
Keywords: دو رشته; Tissue-specific expression; Snake venom PLA2; ESE-3; ETS transcription factor; PLA2; phospholipase A2; P; protobothrops; ETS; E twenty-six; ESE; epithelium-specific ETS transcription factor; CHO; Chinese hamster ovary; FITC; fluorescein isothiocyanate; ES
Exploring the interaction between small RNAs and R genes during Brachypodium response to Fusarium culmorum infection
Keywords: دو رشته; ABA; Abscisic Acid; ANOVA; Analysis of Variance; bp; base pairs; BLAST; Basic Local Alignment Search Tool; cDNA; DNA complementary to RNA; CDS; Coding Sequence; DCL; Dicer-Like (nuclease); DNA; deoxyribonucleic acid; DNase; Deoxyribonuclease; ds; double-s
Single-, double- and triple-stranded helical metal complexes of chiral tetradentate pyridyl-thiazole ligands: Stereoselective synthesis, spectroscopic properties and structural characterization
Keywords: دو رشته; Helical metal complex; Chiral tetradentate ligand; Pyridyl-thiazole; Double-stranded; Triple-stranded
The intricate interplay between RNA viruses and NF-κB
Keywords: دو رشته; ss; single-stranded; ds; double-stranded; HTLV; human T cell leukemia virus; SARS; severe acute respiratory syndrome; IAVs; influenza A viruses; IFN; interferon; IRF3; interferon regulatory factor 3; NF-κB; nuclear factor κB; TLRs; toll-like receptors;
HIV-1 translation and its regulation by cellular factors PKR and PACT
Keywords: دو رشته; ADAR; adenosine deaminase acting on RNA; ds; double-stranded; dsRBD; dsRNA binding domain; dsRBP; dsRNA binding protein; eIF; eukaryotic translation initiation factor; HCV; Hepatitis C virus; HDV; Hepatitis D virus; HIV; human immunodeficiency virus; HTLV
Human NEIL3 is mainly a monofunctional DNA glycosylase removing spiroimindiohydantoin and guanidinohydantoin
Keywords: دو رشته; 5OHC; 5-hydroxy-2â²-deoxycytidine; 5OHU; 5-hydroxy-2â²-deoxyuridine; AP; apurinic/apyrimidinic; BER; base excision repair; CV; column volume; faPy; 2,6-diamino-4-hydroxy-5-formamidopyrimidine; Fpg; Escherichia coli formamidopyrimidine DNA glycosylase; G
STAT1 requirement for PKR-induced cell cycle arrest in vascular smooth muscle cells in response to heparin
Keywords: دو رشته; IFN; interferon; PKR; protein kinase, RNA-activated; VSMC; vascular smooth muscle cell; Cdk2; cyclin-dependent kinase 2; STAT1; signal transducer and activator of transcription-1; ds; double-stranded; JAK1; janus kinase 1; ATRA; all-trans retinoic acid; F
Role of the conserved lysine within the Walker A motif of human DMC1
Keywords: دو رشته; HR; homologous recombination; hDMC1; human DMC1; hRAD51; human RAD51; ss; single-stranded; ds; double-stranded; NTA; nitrilotriacetic acid; BSA; bovine serum albumin; SDS-PAGE; sodium dodecyl sulfate polyacrylamide gel electrophoresis; DMC1; Meiotic recom
Fibronectin inhibits cytokine production induced by CpG DNA in macrophages without direct binding to DNA
Keywords: دو رشته; AF488; alexa fluor 488; cFN; cellular fibronectin; CpG motif; unmethylated CpG dinucleotide; ds; double-stranded; FN; fibronectin; LA2000; Lipofectamine2000; MFI; mean fluorescence intensity; pDNA; plasmid DNA; pFN; plasma fibronectin; TNF; tumor necrosis
Alkbh2 protects against lethality and mutation in primary mouse embryonic fibroblasts
Keywords: دو رشته; MMS; methylmethane sulfonate; ds; double-stranded; ss; single-stranded; ODN; oligodeoxynucleotides; α-KGFdiO; α-ketoglutarate Fe(II) dioxygenase; MEFs; mouse embryonic fibroblasts; mESCs; mouse embryonic stem cells; DNA repair; AlkB homologs; Fe(II)/α-
Use of the hollow fiber assay for the evaluation of DNA damaging agents
Keywords: دو رشته; Antitumour drug screening; DNA break; Double-stranded; Doxorubicin; Duocarmycin; Hollow fiber assay
Increase in CpG DNA-induced inflammatory responses by DNA oxidation in macrophages and mice
Keywords: دو رشته; CpG motif; unmethylated CpG dinucleotide; TLR; Toll-like receptor; LPS; lipopolysaccharide; ROS; reactive oxygen species; RA; rheumatoid arthritis; mtDNA; mitochondrial DNA; nDNA; nuclear DNA; ODN; oligodeoxynucleotide; PO; phosphodiester; PS; phosphoroth
The budding yeast Mei5-Sae3 complex interacts with Rad51 and preferentially binds a DNA fork structure
Keywords: دو رشته; HR; homologous recombination; ss; single-stranded; ds; double-stranded; NTA; nitrilotriacetic acid; BSA; bovine serum albumin; SDS-PAGE; sodium dodecyl sulfate polyacrylamide gel electrophoresis; Mei5-Sae3; Meiotic recombination; Recombination mediator;
Design and experimental validation of a generic model for combinatorial assembly of DNA tiles into 1D-structures
Keywords: دو رشته; ss; single-stranded; ds; double-stranded; Combinatorial assembly; Deoxyribonucleic acid tile; System biology; Modeling; Kinetic control; Gene synthesis;
Heat shock proteins in oncology: Diagnostic biomarkers or therapeutic targets?
Keywords: دو رشته; 2 DE; 2D gel electrophoresis; 2DPAGE; 2D polyacrylamide gel electrophoresis; AIF; Apoptosis inducing factor; Apaf-1; Apoptotic protease activating factor 1; APC; Antigen presenting cell; ASK-1; Apoptosis Signal-regulating Kinase 1; Bag; Bcl-2-associated a
Reversed-phase ion-pair liquid chromatography analysis and purification of small interfering RNA
Keywords: دو رشته; Oligonucleotide; Duplex; Double-stranded; RNA; DNA; Ultra-performance liquid chromatography (UPLC); HPLC; Mass spectrometry
Repair of methyl lesions in DNA and RNA by oxidative demethylation
Keywords: دو رشته; AlkB proteins; iron; 2-oxoglutarate; oxygenase; macromolecular damage; εA; 1,N6-ethenoadenine; ABH; mammalian AlkB homologue; BER; base excision repair; εC; 3,N4-ethenocytosine; ds; double-stranded; Fe2+; ferrous iron; hABH; human AlkB homologue; JHDM;
Three-dimensional structure and stoichiometry of Helmintosporium victoriae190S totivirus
Keywords: دو رشته; 3DR, three-dimensional reconstruction; CP, capsid protein; cryo-EM, cryo-electron microscopy; ds, double-stranded; ctf, contrast transfer function; Hv190SV, Helminthosporium victoriae 190S virus; RDRP, RNA-dependent RNA polymeraseHv190SV; Double-stranded
The Drosophila melanogaster DmCK2β transcription unit encodes for functionally non-redundant protein isoforms
Keywords: دو رشته; a.e.; after eclosion; cDNA; DNA complementary to RNA; CHK1; checkpoint kinase 1; CHK2; checkpoint kinase 2; CK2; casein kinase 2; Dm; Drosophila melanogaster; ds; double-stranded; GT; gene trap; h; hour; HA; hemagglutinin; HEK; human embryonic kidney; mbu
A DNA binding motif of meiotic recombinase Rec12 (Spo11) defined by essential glycine-202, and persistence of Rec12 protein after completion of recombination
Keywords: دو رشته; RF; recombinant frequency; cM; centimorgan; ss; single-stranded; ds; double-stranded; Homologous recombination; Genetic recombination; Meiosis; Fission yeast; Schizosaccharomyces pombe; Topoisomerase;
Novel modes of protein-RNA recognition in the RNAi pathway
Keywords: دو رشته; ds; double-stranded; dsRBD; dsRNA-binding domain; Kd; dissociation constant; miRNA; micro RNA; OB-fold; oligonucleotide/oligosaccharide-binding fold; PAZ; Piwi, Argonaute, Zwille; PTGS; post-transcriptional gene silencing; RISC; RNA-induced silencing comp