Keywords: AUC; area under the curve; BC; breast cancer; BCP; breast cancer patient; BMI; body mass index; BSTFA; N,O-Bis(trimethylsilyl)trifluoroacetamide; CP; control patient; CV; coefficient of variation; DG; diacylglycerol; ESI; electrospray ionization; FDR; fal
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Keywords: AGRIS; Arabidopsis Gene Regulatory Information Server; AtcisDB; Arabidopsis thaliana cis-regulatory element database; AtPAN; Arabidopsis thaliana Promoter Analysis Net; AtRegNet; Arabidopsis thaliana regulatory network; AtTFDB; Arabidopsis thaliana transc
Keywords: Bisphenol A; Pregnancy; Metabolomics; FAAH; Endocannabinoids; 2-AG; 2-arachidonoylglycerol; AMCAA; AMC Arachidonyl Amide; AEA; anandamide; BSTFA; N,O-bis(trimethylsilyl)trifluoroacetamide; eCB; endocannabinoids; FAA; fatty acid amide; FAAH; fatty acid ami
Keywords: Subjective memory complaints; Perceived health; Depression; Everyday memory; MFE; Alzheimer's disease;
Liquid chromatography-high resolution mass spectrometric methods for the surveillance monitoring of cyanotoxins in freshwaters
Keywords: Adda; (2S,3S,8S,9S)â3-amino-9-methoxy-2,6,8-trimethyl-10-phenyldeca-4,6-dienoic acid; ANP; anabaenopeptin; CID; collision-induced dissociation; dm; demethyl; EIC; extracted ion chromatogram; HRMS; high resolution mass spectrometry; IS; internal standard
Keywords: Petri Nets; UAV; UAS; Safety assessment; ARP; Aerospace Recommended Practice; CMA; Common Mode Analysis; Comms Fails; Communications Fails; FAA; Federal Aviation Administration; FHA; Functional Hazard Assessment; Fght Fails; Flight Controls Fails; FMEA; F
Keywords: AdsCSV; adsorptive cathodic stripping voltammetry; ACA; p-allylcalix[4]arene; AgAuE; Ag-Au alloy electrode; ASV; anodic stripping voltammetry; BiABE; bismuth bulk annular band working electrode; Crown-6-SPCNFE; 4-carboxybenzo-18-crown-6 screen-printed c
Keywords: ACToR; EPA's Aggregated Computational Toxicology Resource; AHHS; American Healthy Homes Survey; AhR; aryl hydrocarbon receptor; AR; androgen receptor; CASRN; Chemical Abstract Services Registry Number; DI; deionized; DSSTox; EPA's Distributed Structure-Se
Keywords: Implicit scheme; MFE; FV; Two-phase; Peng-Robinson; Newton-Raphson;
A family based triad study evaluating the role of MTHFR gene polymorphisms in spontaneous abortions
Keywords: MTHFR; methylenetetrahydrofolate reductase; ARMS-PCR; Amplification Refractory Mutation System-Polymerase Chain Reaction method; OR; odds ratios; CI; confidence intervals; MFE; minimum free energy; kcal/mol; kilocalorie/mole; mRNA; messenger ribonucleic
Discovery and characterization of conserved and novel microRNAs from blunt snout bream (Megalobrama amblycephala) by deep sequencing
Keywords: nt; Nucleotides; UTRs; 3â² untranslated regions; RISC; RNA-induced silencing complex; pri-miRNAs; Primary miRNAs; pre-miRNAs; precursor miRNAs; LPS; Lipopolysaccharide; GO; Gene ontology; KEGG; Kyoto Encyclopedia of Genes and Genomes; NCBI; National Cent
Choice of mineral fertilizer substitution principle strongly influences LCA environmental benefits of nutrient cycling in the agri-food system
Keywords: FU; functional unit; ha; hectare; K; potassium; LCA; life cycle assessment; LCI; life cycle inventory analysis; LCIA; life cycle impact assessment; MFE; mineral fertilizer equivalent; MFE-N, -P, and -K; mineral fertilizer equivalent of nitrogen, phosphoru
Genome-wide identification and profiling of microRNAs in Paulownia tomentosa cambial tissues in response to seasonal changes
Keywords: miRNAs; microRNAs; nt; nucleotide; scRNA; small cytoplasmic RNA; snRNA; small nuclear RNA; snoRNA; small nucleolar RNA; GO; Gene Ontology; KEGG; Kyoto Encyclopedia of Genes and Genomes; MFE; minimum folding free energy; MFEI; minimal folding free energy i
Metabolomics profiling of steatosis progression in HepaRG® cells using sodium valproate
Keywords: ACN; acetonitrile; ADP; adenosyl-diphosphate; AM/MS; accurate mass/mass spectrometry; ATP; adenosyl-triphosphate; BHT; butyl-hydroxytoluene; CAWG; chemical analysis working group (metabolomics society); Cer; ceramide; CHCl3; chloroform; DG; diacylglycerol
Autonomously Controlled Magnetic Flexible Endoscope for Colon Exploration
Keywords: APM; actuating permanent magnet; MFE; magnetic flexible endoscope;
Computational identification and characterization of conserved miRNAs and their putative target genes in Eclipta prostrata
Keywords: %; Percentage; ÎG; Free energy; miRNA; MicroRNAs; GSS; Genome Survey Sequences; BLAST; Basic Local Alignment Search Tool; dbGSS; Database of Genome Survey Sequences; NCBI; National Center for Biotechnology Information; MEGA; Molecular Evolutionary Geneti
Hsa-miR-11181 regulates Wnt signaling pathway through targeting of APC2 transcripts in SW480 cell line
Keywords: Wnt; wingless-type; APC; adenomatosis polyposis coli; Axin; axis inhibition protein; FZ; frizzled; LEF; lymphoid enhancer binding factor; TCF; T-cell-specific factor; GSK3-β; glycogen synthase kinase 3-beta; TRE; transcriptional response element; Dsh; di
Evaluation of in vivo wound healing and anti-inflammatory activity of crude extract of the fruits of Brucea antidysentrica in mice
Keywords: AAU; Addis Ababa University; ANOVA; analysis of variance; COX; cyclooxygenase; EP; epithelialization Period; EPHI; Ethiopian Public Health Institute; LD50; medial lethal dose; MF; master formula; MFE; methanol fruit extract; OECD; Organization for Economi
Association between miR-218 rs11134527 polymorphism and risk of selected types of cancer in Asian population: An updated meta-analysis of case-control studies
Keywords: CIs; confidence intervals; ESCC; esophageal squamous cell carcinoma; MFE; minimum free energy; miRNA; microRNA; NSSLC; non-small cell lung cancer; ORs; odds ratio; PCR; polymerase chain reaction; RFLP; restriction fragments length polymorphism; UTR; untra
Identification, characterization and expression analysis of pigeonpea miRNAs in response to Fusarium wilt
Keywords: DPI; days post inoculation; EST; expressed sequence tag; miRNA; microRNA; MFE; minimum folding energy; MFEI; minimum folding energy index; HS-C; highly susceptible-control; HS-T; highly susceptible-treatment; HR-C; highly resistant-control; HR-T; highly r
A specific haplotype in potential miRNAs binding sites of secreted frizzled-related protein 1 (SFRP1) is associated with BMD variation in osteoporosis
Keywords: BMD; bone mineral density; BMC; bone mineral content; BMI; body mass index; MFE; minimum free energy; PCR; polymerase chain reaction; RFLP; restriction-fragment length polymorphism; SFRP1; secreted frizzled-related protein 1; SNP; single nucleotide polymo
In silico identification of microRNAs and their targets associated with coconut embryogenic calli
Keywords: Cocos nucifera; Embryogenic calli; miRNA; Recalcitrance; Somatic embryogenesis; ARF; Auxin Response Factors; BR; Brassinosteroids; CUC2; Cup-shaped cotyledon 2; MAPK; Mitogen-activated protein kinase; MFE; Mean Forecast Error; miRNA; micro RNA; NJ; Neighb
Bioinformatics profiling and expressional studies of microRNAs in root, stem and leaf of the bioenergy plant switchgrass (Panicum virgatum L.) under drought stress
Keywords: Biofuel crop; Abiotic stress; Regulatory RNAs; qRT-PCR; Aly; Arabidopsis lyrata; AP; APETELA; ARF; Auxin Response Factor; Ath; Arabidopsis thaliana; ATP; Adenosine Tri Phosphate; BLAST; Basic Local Alignment Search Tool; BLASTx; Translated Nucleotide Prot
Remarkable sequence polymorphisms in 18S rDNA of Pleuronichthys cornutus (Pleuronectiformes: Pleuronectidae)
Keywords: DNA; Deoxyribonucleic acid; rDNA; DNA coding for rRNA, ribosomal RNA gene; ITS; internal transcribed spacer; IGS; Intergenic spacer; PCR; Polymerase chain reaction; dNTP; Deoxyribonucleoside triphosphate; MFE; minimum free energy; K2P; Kimura-2-parameter;
Mitochondrial tRNALeu(UUR) C3275T, tRNAGln T4363C and tRNALys A8343G mutations may be associated with PCOS and metabolic syndrome
Keywords: PCOS; polycystic ovary syndrome; T2DM; type 2 diabetes mellitus; MetS; metabolic syndrome; mtDNA; mitochondrial DNA; TG; triglyceride; HbA1c; Hemoglobin A1c; MMP; mitochondrial membrane potential; ROS; reactive oxygen species; PMNs; polymononuclear leukoc
In silico design of ligand triggered RNA switches
Keywords: UTR; untranslated region; mRNA; messenger RNA; SELEX; Systematic Evolution of Ligands by EXponential enrichment; MFE; minimum free energy; RBS; Ribosome Binding Site; Inverse folding; Multi state design; RNA design; Riboswitch; Objective function; RNA kin
In silico identification and characterization of microRNAs based on EST and GSS in orphan legume crop, Lens culinaris medik. (Lentil)
Keywords: microRNA; Lentils; Expressed Sequence Tags (EST); Genome Survey Sequence (GSS); Target gene; Functional annotation; RNAi; RNA interference; EST; Expressed Sequence Tag; GSS; Genome Survey Sequence; BLAST; Basic Local Alignment Search Tool; MFE; Minimal Fo
Vitamin D compounds inhibit cancer stem-like cells and induce differentiation in triple negative breast cancer
Keywords: Vitamin D; Stem cells; Mammosphere; Breast cancer; OCT4; 1α,25(OH)2D3; 1α,25-dihydroxyvitamin D3; TNBC; triple negative breast cancer; MFE; mammosphere forming efficiency; NFκB; nuclear factor kappa-light-chain-enhancer of activated B cells; DCIS; duct
RNA editing independently occurs at three mir-376a-1 sites and may compromise the stability of the microRNA hairpin
Keywords: A; adenosine; ADAR; adenosine deaminase; Cq; quantification cycle; dsRNA; double-stranded RNA; G; guanosine; I; inosine; MFE; minimum free energy; mRNA; messenger RNA; miRNA; microRNA; NGS; next generation sequencing; nt; nucleotide; RT-qPCR; real time qu
The effects of structure on pre-mRNA processing and stability
Keywords: MFE; minimum free energy; DP; dynamic programming; MEA; maximum expected accuracy; RBP; RNA-binding protein; U2AF2; U2 Small Nuclear RNA Auxiliary Factor 2; HLA; Human Leukocyte Antigen; SNP; single nucleotide polymorphism; HGMD; Human Gene Mutation Datab
miRNA mediated gene regulatory network analysis of Cichorium intybus (chicory)
Keywords: miRNA; microRNA; MFE; minimal folding energy; MFEI; minimal folding index; GO; gene ontology; EST; expressed sequence tag; GSS; genome survey sequence; Cichorium intybus; Chicory; In- silico analysis; miRNA prediction; Target genes; Small RNAs;
Research articleIdentification of miRNA from Bouteloua gracilis, a drought tolerant grass, by deep sequencing and their in silico analysis
Keywords: EST; Expressed Sequence Tag; SOAP; Short Oligonucleotide Alignment Program; MFE; Minimum Folding Energies; UPE; unpaired energy; Osa; Oryza sativa; Zma; Zea mays; Sbi; Sorghum bicolor; Ath; Arabidopsis thaliana; Blue grama; miRNA; In silico analysis; Drou
No 347-Prise en charge obstétricale près de la limite de viabilité du fÅtus
Keywords: Borderline viability; extreme prematurity; antenatal corticosteroids; magnesium sulfate for fetal neuroprotection; mode of delivery; delayed cord clamping; cord milking; maternal transfer; maternal place of care; CSP; corticostéroïdes prénataux; HIV; h
Genome-wide identification and characterization of microRNAs and target prediction by computational approaches in common carp
Keywords: RISC; RNA-induced silencing complex; nt; nucleotides; UTR; Untranslated regions; U; uracil; SVM; Support Vector Machine; qRT-PCR; quantitative RT-PCR; MFE; minimal free energy; MFEI; minimal free energy index; GO; Gene Ontology; KEGG; Kyoto Encyclopedia o
Long noncoding RNAs: Unexplored players in the drug response of the sea louse Caligus rogercresseyi
Keywords: lncRNAs; long non-coding RNAs; GC; guanine-cytosine; ncRNAs; non-coding RNAs; miRNAs; microRNAs; siRNAs; small interfering RNAs; piRNAs; PIWI-interacting RNAs; MFE; minimum free energy; RPKM; transcript as reads per kilobase of exon model per million mapp
Associating genetic variation at Perilipin 1, Complement Factor D and Adiponectin loci to the bone health status in North Indian population
Keywords: PLIN1; Perilipin 1; CFD; Complement Factor D; ADIPOQ; Adiponectin; QUS; quantitative ultrasound; BMD; bone mineral density; MSC; mesenchymal stem cell; T2D; type 2 diabetes; HWE; Hardy-Weinberg Equilibrium; OR; odds ratio; LD; linkage disequilibrium; MDR;
Identification of potential stress responsive microRNAs and their targets in Cajanus spp.
Keywords: EST; expressed sequence tag; miRNA; microRNA; PTGS; post-transcriptional gene silencing; RISC; RNA induced silencing complex; MFE; minimum folding energy; MFEI; minimum folding energy index; Pigeonpea; MicroRNA; Expressed sequence tags; Minimum folding en
MMP 1 circulating levels and promoter polymorphism in risk prediction of coronary artery disease in asymptomatic first degree relatives
Keywords: CAD; coronary artery disease; LDL; low density lipoprotein; MMP; matrix metalloproteinase; NSTEMI; non-ST elevated myocardial infarction; STEMI; ST elevated myocardial infarction; FDRS; first degree relatives; TGL; triglycerides; GPO; glycerol phosphate o
Postprandial metabolomics: A pilot mass spectrometry and NMR study of the human plasma metabolome in response to a challenge meal
Keywords: Metabolomics; Postprandial; Multi-platform analysis; Data analysis; Mass spectrometry; Nucleic magnetic resonance; ANOVA; ANalysis Of VAriance; CV-ANOVA; Cross Validation-ANalysis Of VAriance; MFE; Mass Feature Extraction; MVA; multivariate analysis; OPLS
The effect of rare codons following the ATG start codon on expression of human granulocyte-colony stimulating factor in Escherichia coli
Keywords: CAI; codon adaptation index (an index of codon usage bias towards the codon usage of highly expressed genes); hG-CSF; human granulocyte colony stimulating factor; MFE; minimum free energy; rhG-CSF; recombinant hG-CSF; SD; Shine-Dalgarno; Granulocyte-colon
Vitamin D compounds reduce mammosphere formation and decrease expression of putative stem cell markers in breast cancer
Keywords: 1α,25(OH)2D3; 1α,25-dihydroxyvitamin D3; BCSC; breast cancer stem cell; DCIS; ductal carcinoma in situ; GATA3; GATA binding protein 3; IDC; invasive ductal carcinoma; KLF4; Kruppel-like factor 4; MFE; mammosphere forming efficiency; NFκB; nuclear facto
Research paperIdentification of differentially expressed microRNA in the stems and leaves during sugar accumulation in sweet sorghum
Keywords: RT-qPCR; real-time quantitative PCR; NCBI; National Center of Biotechnology Information; miRNA; microRNA; pre-miRNA; microRNA precursor; pri-miRNA; microRNA primary transcript; GO; Gene Ontology; MFE; minimum free energy; MFEI; minimum fold energy index;
Profiling microRNAs and their targets in an important fleshy fruit: Tomato (Solanum lycopersicum)
Keywords: aly; Arabidopsis lyrata; ath; Arabidopsis thaliana; bdi; Brachypodium distachyon; BLAST; Basic Local Alignment Search Tool; dbEST; Database of EST; DCL1; Dicer-like Enzyme1; ESTs; Expressed Sequence Tags; gma; Glycine max; MFE; Minimum Free Energy; MIR; M
APeg3: regulation of Peg3 through an evolutionarily conserved ncRNA
Keywords: ORF; Open Reading Frame; MFE; minimal fold energy; ncRNA; non-coding RNA; TSS; transcriptional start site; Peg3; paternally expressed gene 3; APeg3; antisense paternally expressed gene 3; CMV; Cytomegalovirus; BGH; Bovine Growth Hormone; mm9; Mus musculus
Identification and characterization of microRNAs in the crab-eating macaque (Macaca fascicularis) using transcriptome analysis
Keywords: miRNAs; microRNAs; M. fascicularis; Macaca fascicularis; SMC; skeletal muscle cell; ES; embryonic stem; HF; heart failure; RCC; renal cell carcinoma; MFE; minimal folding free energy; MFEI; minimal folding free energy index; DEPC; diethylpyrocarbonate; PB
Pharmacokinetic characterization of mangosteen (Garcinia mangostana) fruit extract standardized to α-mangostin in C57BL/6 mice
Keywords: ACN; acetonitrile; AUC; area under the curve; AUCinf; area under the curve from 0 to infinity; AUClast; area under the curve from 0 to 24 hours; Cmax; maximal concentration; LC-MS/MS; liquid chromatography-tandem mass spectrometry; MFE; mangosteen fruit
Bioinformatic identification and experimental validation of miRNAs from foxtail millet (Setaria italica)
Keywords: 5â²-RLM-RACE; RNA-ligase-mediated rapid amplification of cDNA ends; A; adenosine; BLAST; basic local alignment search tool; DCL1; Dicer-like-1; EST; expressed sequence tag; GSS; genomic survey sequence; GO; gene ontology; MFE; minimal folding free energy
Combined small RNA and degradome sequencing reveals microRNA regulation during immature maize embryo dedifferentiation
Keywords: ARF; auxin response factor; CK; the control; DEM; differentially expressed miRNA; Dicer; double-stranded-specific RNase; GA; gibberellin; HLH; helix-loop-helix; MFE; minimum free energy; miRNA; microRNA; NAM; no apical meristem; QTL; quantitative trait lo
Are Feed-in Tariffs suitable for promoting solar PV in New Zealand cities?
Keywords: COE; cost of energy; EA; New Zealand Electricity Authority; EECA; New Zealand's Energy Efficiency and Conservation Authority; FIT; Feed-in Tariff; GRU; Gainesville Regional Utility; HOMER; Hybrid Optimization Model for Electric Renewables, a software prog
Evaluation of the authenticity of a highly novel environmental sequence from boreal forest soil using ribosomal RNA secondary structure modeling
Keywords: NS1; Novel Sequence Type One; BFL; basal fungal lineages; rRNA; ribosomal RNA; rDNA; ribosomal DNA; ITSs; internal transcribed spacers; SSU; small subunit; LSU; large subunit; MFE; minimal free energy; CBC; compensatory base change; NUMT; mitochondrion-de