Keywords: پیوستن همسایه; Phylogenetic analysis; Gene ontology annotation; Promoter analysis; Expression profiles analysis; bHLH; basic helix-loop-helix; PEG; polyethylene glycol; ABA; abscisic acid; MeJA; methyl jasmonate; qRT-PCR; quantitative real-time PCR; Ks; number of synony
مقالات ISI پیوستن همسایه (ترجمه نشده)
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Keywords: پیوستن همسایه; BI; Bayesian inference; M; Maximum Likelihood; NJ; neighbor-joining; CO; subunit of cytochrome oxidase; Cytb; cytochrome b; NAD; NADH dehydrogenase; Mitogenome; Phylogenetics; Efficiency of molecular markers; Next generation sequencing; Invertebrates;
Keywords: پیوستن همسایه; DPG; diphosphatidylglycerol; DDH; DNA-DNA hybridization; FAMEs; fatty acid methyl esters; MK; menaquinone; ML; maximum likelihood; MP; maximum parsimony; NJ; neighbor-joining; PC; phosphatidylcholine; PE; phosphatidylethanolamine; PG; phosphatidylglycerol
Keywords: پیوستن همسایه; DENV; dengue virus; DF; dengue fever; DHF; dengue hemorrhagic fever; E; envelope; G; genotype; ADE; antibody-dependent enhancement; MAb; monoclonal antibody; NJ; neighbor-joining; MCMC; Markov Chain Monte Carlo; BEAST; Bayesian Evolutionary Analysis by Sa
Keywords: پیوستن همسایه; DuCV; duck circovirus; PCR; polymerase chain reaction; nt; nucleotide; PASC; pairwise sequence comparison; PRE; potential recombination event; dN; non-synonymous substitutions; dS; synonymous substitutions; ML; maximum-likelihood; NJ; neighbor-joining; MP
Identification and comprehensive analysis of the characteristics and roles of leucine-rich repeat receptor-like protein kinase (LRR-RLK) genes in Sedum alfredii Hance responding to cadmium stress
Keywords: پیوستن همسایه; PP2C68; protein phosphatase 2C68; MPK5; mitogen protein kinase 5; LRR-RLK; leucine-rich repeat receptor-like kinase; NPR1; non-expressor pathogenesis-related 1; SERK; Somatic Embryogenesis Receptor Kinase; LRR_8; leucine-rich repeat 8; LRR_1; leucine-rich
CpMCA, a novel metacaspase gene from the harmful dinoflagellate Cochlodinium polykrikoides and its expression during cell death
Keywords: پیوستن همسایه; BLAST; Basic Local Alignment Search Tool; cDNA; complementary DNA; CT; cycle threshold; DinoSL; dinoflagellates splice-leader; EST; expression sequence tag; HABs; harmful algal blooms; HSPs; heat shock proteins; KatG; catalase-peroxidase; HGT; horizontal
Genome-wide identification of the SWEET gene family in wheat
Keywords: پیوستن همسایه; SWEET; sugars will eventually be exported transporter; TMHs; transmembrane helices; LC; Little Club; Ta; Triticum aestivum; MSAs; multiple sequence alignments; NJ; Neighbor-joining; SEM; scanning Electron Microscope; Sweet; Sugar transporter; Stem rust; I
Functional characterization of an apple (Malus x domestica) LysM domain receptor encoding gene for its role in defense response
Keywords: پیوستن همسایه; CERK; chitin elicitor receptor kinase; PRR; pattern recognition receptor; GST; glutathione S-transferase; PAMP; pathogen-associated molecular patterns; PTI; PAMP-triggered immunity; ROS; reactive oxygen species; ETS; effector-triggered susceptibility; ETI
Conserved structure and function of chemokine CXCL8 between Chinese tree shrews and humans
Keywords: پیوستن همسایه; CXCL8; chemokine (C-X-C) ligand 8; CXCR1; C-X-C motif chemokine receptor 1; CXCR2; C-X-C motif chemokine receptor 2; Ts; tree shrew; 3D; three-dimensional; PBMCs; peripheral blood mononuclear cells; MHC; major histocompatibility complex; IL-2; interleukin
Molecular cloning and characterization of a gonadotropin-releasing hormone receptor homolog in the Chinese mitten crab, Eriocheir sinensis
Keywords: پیوستن همسایه; ORF; open reading frame; cDNA; complementary DNA; RACE; rapid amplification of cDNA ends; UTR; untranslated region; aa; amino acids; DIG; digoxigenin; ISH; in situ hybridization; RT; reverse transcription; qPCR; quantitative real-time PCR; Ct; crossing-po
Temporal and spatial expression of fgfbp genes in zebrafish
Keywords: پیوستن همسایه; CNS; central nervous system; Di; diencephalon; ECM; extracellular matrix; FGF; fibroblast growth factor; FGFBP; fibroblast growth factor binding protein; HB; hindbrain; hpf; hour post-fertilization; Li; liver; MB; midbrain; MBT; mid-blastula transition; M
Genome-wide analysis of Eucalyptus grandis WRKY genes family and their expression profiling in response to hormone and abiotic stress treatment
Keywords: پیوستن همسایه; SA; salicylic acid; MeJA; methyl jasmonate; BR; brassinosteroid; pI; isoelectric point; NJ; neighbor-joining; MBS; MYB-binding site; ABRE; ABA-responsive element; LTR; low-temperature-responsive; Eucalyptus grandis; WRKY gene family; Expression pattern; A
In silico identification of microRNAs and their targets associated with coconut embryogenic calli
Keywords: پیوستن همسایه; Cocos nucifera; Embryogenic calli; miRNA; Recalcitrance; Somatic embryogenesis; ARF; Auxin Response Factors; BR; Brassinosteroids; CUC2; Cup-shaped cotyledon 2; MAPK; Mitogen-activated protein kinase; MFE; Mean Forecast Error; miRNA; micro RNA; NJ; Neighb
Genome-wide identification of lectin receptor kinases in pear: Functional characterization of the L-type LecRLK gene PbLRK138
Keywords: پیوستن همسایه; LecRLKs; Lectin receptor-like kinases; EGF; epidermal growth factor; PAN; plasminogen-apple-nematode; NJ; neighbor-joining; MS; Murashige and Skoog; qPCR; quantitative reverse transcription PCR; GFP; green fluorescent protein; PR; pathogenesis related; LR
Molecular cloning of androgen receptor and gene expression of sex steroid hormone receptors in the brain of newborn Chinese alligator (Alligator sinensis)
Keywords: پیوستن همسایه; AR; androgen receptor; ARα and ARβ; androgen receptor alpha and androgen receptor beta; ESR1; estrogen receptor 1; ESR2; estrogen receptor 2; PR; progesterone receptor; TSD; temperature-dependent sex determination; SFA; State Forest Administration; ARCC
Genome wide identification of taste receptor genes in common carp (Cyprinus carpio) and phylogenetic analysis in teleost
Keywords: پیوستن همسایه; tr; taste receptor; tr sequences; taste receptor protein sequences; GPCR; G protein-coupled receptor; t1r; taste receptor type 1; t1r1; taste type 1 receptor 1; t2r200; taste type 2 receptor 200; hT1R2; human T1R2; WGD; whole genome duplication; ML; Maxim
Identification of two isoforms of Pop in the domestic silkworm, Bombyx mori: Cloning, characterization and expression analysis
Keywords: پیوستن همسایه; Aph; acylpeptide hydrolase; AA; alternative acceptor site; AD; alternative donor site; AS; alternative splicing; ANCE; angiotensin-converting enzyme; Ang I; angiotensin I; B. mori; Bombyx mori; BSA; bovin serum albumin; DTT; dithiothreitol; E. coli; Esche
Molecular cloning, transcriptional profiling, and subcellular localization of signal transducer and activator of transcription 2 (STAT2) ortholog from rock bream, Oplegnathus fasciatus
Keywords: پیوستن همسایه; STAT2; signal transducer and activator of transcription 2; JAK; Janus kinase; IL-10; interleukin-10; TYK2; tyrosine kinase 2; IFN; interferon; ISGF3; IFN-stimulated gene factor 3; ISG; IFN-stimulated gene; CREB; cyclic AMP-response element-binding protein
Involvement of caspase3 in the acute stress response to high temperature and elevated ammonium in stony coral Pocillopora damicornis
Keywords: پیوستن همسایه; NJ; neighbor-joining; IPTG; isoprophyl β-d-thiogalactoside; one-way ANOVA; one-way analysis of variance; TNF; tumor necrosis factor; Caspase3; Apoptosis; Heat stress; Ammonium stress; Stony coral;
Complete sequence of chloroplast genome from Sargassum vachellianum (Sargassaceae, Phaeophyceae): Genome structure and comparative analysis
Keywords: پیوستن همسایه; Brown alga; Chloroplast genome; Phaeophyta; Sargassaceae; Sargassum vachellianum; LSC; large single-copy region; SSC; small single-copy region; IR; inverted repeat; NJ; neighbor-joining; SSR; simple sequence repeats;
The evolutionary divergence of STAT transcription factor in different Anopheles species
Keywords: پیوستن همسایه; STAT; Signal Transducer and Activator of Transcription; JAK; Janus kinase; NJ; Neighbor-Joining; An.; Anopheles; MEGA; Molecular Evolutionary Genetics Analysis; UTR; untranslated region; MYA; million years ago; P. berghei; Plasmodium berghei; SOCS; suppre
Identification and characterization of mobile genetic elements LINEs from Brassica genome
Keywords: پیوستن همسایه; aa; amino acids; BAC; bacterial artificial chromosomes; Bo; Brassica oleracea; Bp; base pair; Br; Brassica rapa; CDD; conserved domain database; CTAB; cetyltrimethylammonim bromide; Cv; cultivar; DIRs; Dictyostelium intermediate repeat sequence; DNA; Deox
Genome wide identification, phylogeny, and expression of bone morphogenetic protein genes in tetraploidized common carp (Cyprinus carpio)
Keywords: پیوستن همسایه; Bmp; Bone morphogenetic protein; TGF-β; Transforming growth factor-β; Gdf; Growth and differentiation factors; WGD; whole genome duplication; 4R WGD; 4 round whole genome duplication; bmpr1b; bone morphogenetic protein receptor type-1b; ML; maximum like
Characterization and biological function analysis of the TRIM47 gene from common carp (Cyprinus carpio)
Keywords: پیوستن همسایه; SVCV; Spring viremia of carp virus; SVC; Spring viremia of carp; TRIM47; the tripartite motif protein 47; IRF3; interferon regulator factor 3; ISRE; interferon-stimulated response element; MS-222; 3-aminobenzoic acid ethyl ester methanesulfonate; HZAU; Hu
Evolution, expression analysis, and functional verification of Catharanthus roseus RLK1-like kinase (CrRLK1L) family proteins in pear (Pyrus bretchneideri)
Keywords: پیوستن همسایه; CrRLK1L; Catharanthus roseus RLK1-like kinases; RLKs; receptor-like kinases; PERKs; proline-rich extensin-like receptor-kinases; CRKs; cysteine-rich; LRR-RLKs; leucine-rich repeat RLKs; HERK1; HERCULES Receptor Kinase 1; RALFs; rapid alkalinization factor
Evolutionary history of PEPC genes in green plants: Implications for the evolution of CAM in orchids
Keywords: پیوستن همسایه; CAM; crassulacean acid metabolism; ML; maximum likelihood; NJ; neighbor-joining; PEPC; phosphoenolpyruvate carboxylase; WGD; whole genome duplication; Crassulacean acid metabolism (CAM); Orchidaceae; Phosphoenolpyruvate carboxylase (PEPC); Phylogeny; RNA-
Research paperDivergence of the dengue virus type 2 Cosmopolitan genotype associated with two predominant serotype shifts between 1 and 2 in Surabaya, Indonesia, 2008-2014
Keywords: پیوستن همسایه; DENV; dengue virus; DF; dengue fever; DHF; dengue hemorrhagic fever; C; capsid; prM; pre-membrane; E; envelope; NS; non-structural; NJ; neighbor-joining; MCMC; Markov Chain Monte Carlo; BEAST; Bayesian Evolutionary Analysis by Sampling Trees; MRCA; most r
Heterogeneous genomic locations within NS3, NS4A and NS4B identified for genotyping and subtyping of Hepatitis C virus: A simple genome analysis approach
Keywords: پیوستن همسایه; bs; bootstrap; GTR; general time reversible; HCV; Hepatitis C virus; MCL; maximum composite likelihood; ML; maximum likelihood; N-J; neighbor-joining; RA; reference alignment; SVR; sustained virological response; HCV; Genotyping; Subtyping; Phylogenetic a
Comparative genomics of Bacillus anthracis from the wool industry highlights polymorphisms of lineage A.Br.Vollum
Keywords: پیوستن همسایه; DNA; deoxyribonucleic acid; SNP; single nucleotide polymorphism; canSNP; canonical single nucleotide polymorphism; VNTR; variable-number tandem repeat; MLVA; multiple-locus variable-number tandem repeat analysis; WGS; whole-genome sequencing; NGS; next ge
Evaluation of chloroplast DNA markers for intraspecific identification of Phalaenopsis equestris cultivars
Keywords: پیوستن همسایه; AFLP; amplified fragment length polymorphism; CBOL; consortium for the barcode of life; cpDNA; chloroplast DNA; cpSSR; chloroplast DNA simple sequence repeat; InDel; insertion and deletion; ML; maximum likelihood; NJ; neighbor-joining; nrITS; internal tra
Genome-wide identification and characterization of the R2R3MYB transcription factor superfamily in eggplant (Solanum melongena L.)
Keywords: پیوستن همسایه; HTH; helix-turn-helix; NJ; neighbor-joining; qRT-PCR; real-time quantitative polymerase chain reaction; LED; light-emitting diode; Solanum melongena; R2R3MYB; Phylogenetic analysis; Intron-exon structure; Expression profile; Motif analysis;
A comparison of 454 sequencing and clonal sequencing for the characterization of hepatitis C virus NS3 variants
Keywords: پیوستن همسایه; APD; average pairwise distance; HCV; hepatitis C virus; IQR; interquartile range; NGS; next-generation sequencing; NJ; Neighbor-Joining; NSE; normalized Shannon entropy; SRA; Sequence Read Archive database; SD; standard deviation; RAVs; resistance-associa
Research paperSystematic analysis of maize class III peroxidase gene family reveals a conserved subfamily involved in abiotic stress response
Keywords: پیوستن همسایه; PRXs; class III peroxidases; ROS; reactive oxygen species; H2O2; hydrogen peroxide; Mya; million years ago; CDS; coding sequences; HMM; Hidden Markov Model; NJ; Neighbor-Joining; Os; Oryza sativa; Zm; Zea mays; Sb; Sorghum bicolor; Maize; Class III peroxi
Complete mitochondrial genome of Anadara vellicata (Bivalvia: Arcidae): A unique gene order and large atypical non-coding region
Keywords: پیوستن همسایه; Sb; Scapharca broughtonii; Sk; Scapharca kagoshimensis; Tg; Tegillarca granosa; Av; Anadara vellicata; atp6; ATPase subunit 6 genes; Cytb; cytochrome b gene; cox1-3; cytochrome c oxidase subunits I-III genes; NCR; non-coding region; nad1-6 and nad4l
Characterization and expression analysis of WOX5 genes from wheat and its relatives
Keywords: پیوستن همسایه; AP; adaptor primer; BLAST; basic local alignment search tool; CDA; callus in differentiation medium after days; CIA; callus in induced medium after days; CTAB; cetyltrimethyl ammonium bromide; EAR; ERF-associated amphiphilic repression; EC; embryogenic ca
Molecular characterization and differential expression of multiple goose dopamine D2 receptors
Keywords: پیوستن همسایه; DRD2; Dopamine D2 receptor; cDNA; complementary to RNA; bp; base pair(s); RT-PCR; reverse transcription polymerase chain reaction; SNPs; single nucleotide polymorphisms; indel; insert-deletion; DRD1; Dopamine D1 receptor; DRD3; Dopamine D3 receptor; DRD4;
Identification and expression pattern analysis of Piwi genes during the spermiogenesis of Portunus trituberculatus
Keywords: پیوستن همسایه; A; acrosome; aa; amino acids; AC; apical cap; Ago3; Argonaute3; APES; 3-Aminopropyl-triethoxysilane; AT; acrosomal tubule; BCIP; 5-bromo-4-chloro-3-indolylphosphate; DEPC; diethylpyrocarbonate; DIG; Digoxigenin; EV; endoplasmic reticulum vesicle; GSP; gen
Characteristic of PGDS potential regulation role on spermatogenesis in the Chinese mitten crab Eriocheir sinensis
Keywords: پیوستن همسایه; PGDS; prostaglandin D synthase; GSH; glutathione; PGs; prostaglandins; PGD2; prostaglandin D2; COX; cyclooxygenase; L-PGDS; lipocalin-type PGD synthase; H-PGDS; hematopoietic PGD synthase; Es-PGDS; E. sinensis PGDS gene; sqPCR; semi-quantitative RT-PCR; q
Identification of the glycerol kinase gene and its role in diapause embryo restart and early embryo development of Artemia sinica
Keywords: پیوستن همسایه; GK; glycerol kinase; As-gk; glycerol kinase gene of Artemia sinica; G3P; glycerol 3-phosphate; FBP; fructose-1,6-bisphosphate; PTS; phosphotransferase system; ISH; in situ hybridization; NJ; neighbor-joining; DIG; Digoxigenin; PBS; phosphate-buffered sali
Abundant sequence divergence in the native Japanese cattle Mishima-Ushi (Bos taurus) detected using whole-genome sequencing
Keywords: پیوستن همسایه; mtDNA; mitochondrial DNA; BACs; bacterial artificial chromosomes; SNPs; single-nucleotide polymorphisms; indels; insertions and deletions; UTRs; untranslated regions; PCR; polymerase chain reaction; nsSNPs; non-synonymous SNPs; GO; gene ontology; QTL; qua
Discrimination based on Gly and Arg/Ser at position 673 between dipeptidyl-peptidase (DPP) 7 and DPP11, widely distributed DPPs in pathogenic and environmental gram-negative bacteria
Keywords: پیوستن همسایه; Dipeptidyl peptidase; S46 peptidase; Substrate specificity; Porphyromonas gingivalis; Bacteroidetes; Proteobacteria; DPP; dipeptidyl-peptidase; PgDPP7; DPP7 from P. gingivalis; PgDPP11 and PeDPP11; DPP11 from P. gingivalis and P. endodontalis respectiv
Molecular characterization of major and minor rDNA repeats and genetic variability assessment in different species of mahseer found in North India
Keywords: پیوستن همسایه; AgNO3; silver nitrate; AIC; Akaike Information Criterion; BCIP; 5-bromo-4-chloro-3â²-indolyphosphate p-toluidine salt; CMA3; Chromomycin A3; DNA; deoxyribonucleic acid; dNTPs; deoxynucleoside triphosphates; EMBL; European Molecular Biology Laboratory; FI
Applying DNA barcodes for identification of plant species in the family Araliaceae
Keywords: پیوستن همسایه; TCM; Traditional Chinese Medicine; ITS; Internal Transcribed Spacer; IMPLAD; Institute of Medicinal Plant Development; HMM; Hidden Markov Model; K2P; Kimura 2-Parameter; NJ; Neighbor-joining; BS; Bootstrap Support; CBOL; Consortium for the Barcode of Life
Mitochondrial DNA as effective molecular markers for the genetic variation and phylogeny of the family Osteoglossidae
Keywords: پیوستن همسایه; mtDNA; mitochondrial DNA; ND2; NADH dehydrogenase subunit 2; ATPase6; ATPase subunit 6; PCR; Polymerase Chain Reaction; NJ; neighbor-joining; MP; maximum parsimony; Osteoglossidae; Phylogenetic analysis; Species identification;
Clustering based distributed phylogenetic tree construction
Keywords: پیوستن همسایه; Y-DNA Haplogroups; Clustering; Phylogenetic tree; Neighbor-joining
New insight into the evolution of aquaporins from flowering plants and vertebrates: Orthologous identification and functional transfer is possible
Keywords: پیوستن همسایه; AQPS; aquaporins; PIPs; plasma membrane intrinsic proteins; TIPs; tonoplast intrinsic proteins; NIPs; NOD26-like intrinsic proteins; SIPs; small basic intrinsic proteins; XIPs; x intrinsic proteins; HIPs; hybrid intrinsic proteins; GIPs; GlpF-like intrins
The co-existence of two growth hormone receptors and their differential expression profiles between female and male tongue sole (Cynoglossus semilaevis)
Keywords: پیوستن همسایه; aa; amino acid(s); bp; base pair(s); cDNA; DNA complementary to RNA; Cys; cystine; Gh; growth hormone; Ghr; growth hormone receptor; Igf1; insulin-like growth factor 1; kDa; kilodalton(s); Ghrh; growth hormone-releasing hormone; NJ; Neighbor-Joining; ORF;
HIV-1 genetic diversity and drug resistance among treatment naïve patients from Southern Brazil: An association of HIV-1 subtypes with exposure categories
Keywords: پیوستن همسایه; AIDS; acquired immune deficiency syndrome; ARV; antiretroviral; CPR; calibrated population resistance tool; CRF; circulating recombinant form; DRMs; drug resistance mutations; INT; integrase; INTI; integrase inhibitors; HIV; human immunodeficiency virus;
Cloning two P5CS genes from bioenergy sorghum and their expression profiles under abiotic stresses and MeJA treatment
Keywords: پیوستن همسایه; ABA; abscisic acid; cDNA; DNA complementary to RNA; CDS; coding sequence; DNase; deoxyribonuclease; P5C; Î1-pyrroline-5-carboxylate; P5CDH; Î1-pyrroline-5-carboxylate dehydrogenase; P5CS; Î1-pyrroline-5-carboxylate synthetase; MeJA; Methyl jasmonate; G