A Pid3 allele from rice cultivar Gumei2 confers resistance to Magnaporthe oryzae
Keywords: Oryza sativa; Magnaporthe oryzae; Blast resistance gene; NBS–LRR
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Inheritance of flour paste viscosity is associated with a rice Waxy gene exon 10 SNP marker
Keywords: Waxy gene; SNP; RVA; Oryza sativa; CIM; composite interval mapping; cM; centimorgans; DSC; differential scanning calorimetry; GBSS; granule bound starch synthase; LOD; logarithm of odds ratio; LS; least squares; MLE; maximum likelihood estimate; PVE; perc
Transgressive variants for red pericarp grain with high yield potential derived from Oryza rufipogon Ã Oryza sativa: Field evaluation, screening for blast disease, QTL validation and background marker analysis for agronomic traits
Keywords: Oryza rufipogon; Oryza sativa; Transgressive variants; Red pericarp; Quantitative trait loci; Trait-based marker analysis; Background marker analysis;
Gene tree discordance of wild and cultivated Asian rice deciphered by genome-wide sequence comparison
Keywords: FLcDNA, full-length cDNA; OTU, operational taxonomic unit; RAP, Rice Annotation ProjectGene tree discordance; Oryza sativa; Oryza rufipogon; Incomplete lineage sorting; Hybridization
Isoforms of plasma membrane H+-ATPase in rice root and shoot are differentially induced by starvation and resupply of NO3â or NH4+
Keywords: PM H+-ATPase; Gene expression; Nitrogen; Mineral nutrition; Oryza sativa;
RiceRBP: A database of experimentally identified RNA-binding proteins in Oryza sativa L.
Keywords: RBP, RNA-binding proteinRNA-binding protein; Database; Oryza sativa; Rice seed; Prolamine
Overexpression of OsRDCP1, a rice RING domain-containing E3 ubiquitin ligase, increased tolerance to drought stress in rice (Oryza sativa L.)
Keywords: ABA, abscisic acid; MeJA, methyl jasmonate; RT-PCR, reverse transcriptase-polymerase chain reaction; SA, salicylic acid; Ub, ubiquitinDrought stress; E3 ubiquitin ligase; Oryza sativa; OsRDCP1-overexpressing lines; Rice osrdcp1 knock-out mutant; RING doma
Improved Agrobacterium-mediated co-transformation and selectable marker elimination in transgenic rice by using a high copy number pBin19-derived binary vector
Keywords: ap24; osmotin gene with antifungal activity towards Phytophthora infestans; 2,4-D; 2,4-dichlorophenoxyacetic acid; GOI; gene of interest; gus; β-glucuronidase gene; hph; hygromycin phosphotransferase gene; MS; Murashige and Skoog; nptII; neomycin phospho
Proteomic analysis of secreted proteins from aseptically grown rice
Keywords: Rice; Oryza sativa; Gramineae; Aseptically growth; Hydroponic culture; Proteome; Root; Secreted proteins; Plants; BPB; bromophenol blue; CHAPS; 3-[(3-cholamidopropyl) dimethylammonio]-1-propanesulfonate; DTT; dithiothreitol; IPG; immobilized pH gradient;
Comparison of the role of gibberellins and ethylene in response to submergence of two lowland rice cultivars, Senia and Bomba
Keywords: ACC, 1-aminocyclopropane-1-carboxylic-acid; GA, gibberellin; GAox, GA oxidase; 1-MCP, 1-methylcyclopropene; PAC, paclobutrazol; WT, wild typeEthylene; Gibberellins; Lowland rice; Oryza sativa; Submergence
A circadian and an ultradian rhythm are both evident in root growth of rice
Keywords: RERs, root elongation rates; DD, continuous dark; LD, alternating light and dark; DT, diurnal temperature change; PSD, power spectral densityCircumnutation; Endogenous rhythm; Oryza sativa; Periodicity; Root elongation
Physiological characterization of introgression lines derived from an indica rice cultivar, IR64, adapted to drought and water-saving irrigation
Keywords: Drought adaptation; Oryza sativa; Root system architecture; Yield potential
Phosphorylation-mediated regulation of a rice ABA responsive element binding factor
Keywords: Rice; Oryza sativa; Gramineae; ABRE binding factor; Transactivation domain; Multi-site phosphorylation; SNF1 related protein kinase; Hyperosmotic stress;
Cropping calendar options for rice–wheat production systems at high-altitudes
Keywords: Cold sterility; Nepal; Oryza sativa; Photo-thermal constants; RIDEV
Differential salinity-induced variations in the activity of H+-pumps and Na+/H+ antiporters that are involved in cytoplasm ion homeostasis as a function of genotype and tolerance level in rice cell lines
Keywords: H+-pumps; Na+/H+ antiport; Oryza sativa; Plasma membrane; Rice callus lines; Salinity tolerance; TonoplastFW, fresh weight; GUS, sequence that encodes ß-glucuronidase (GUS); MU, methyl umbelliferone; UBI1, a maize polyubiquitin gene promoter; X-GLUC, 5-br
Diurnal and phenological variations of O3 and CO2 fluxes of rice canopy exposed to different O3 concentrations
Keywords: Chamber; Ozone; Carbon dioxide; Flux; Oryza sativa; Jarvis model
Oryzamutaic acids H-J, new alkaloids from an Oryza sativa mutant with yellow endosperm
Keywords: Oryza sativa; Poaceae; Alkaloid; Oryzamutaic acids H-J;
Effect of the sequence context of the AUG initiation codon on the rate of translation in dicotyledonous and monocotyledonous plant cells
Keywords: Translation efficiency; Context around initiation codon; Arabidopsis thaliana T87; Oryza sativa; Protoplast
Rice husk bio-oil upgrading by means of phase separation and the production of esters from the water phase, and novolac resins from the insoluble phase
Keywords: Oryza sativa; Bio-oil; Pyrolysis; Upgrading; Reactive rectification; Novolac resins
Yield benefit and underlying cost of insect-resistance transgenic rice: Implication in breeding and deploying transgenic crops
Keywords: Oryza sativa; Insect resistance; Transgene; Transgenic breeding; Genetically modified crop
Analysis of peroxidase activity of rice (Oryza sativa) recombinant hemoglobin 1: Implications for in vivo function of hexacoordinate non-symbiotic hemoglobins in plants
Keywords: Hb; hemoglobin; HRP; Horseradish peroxidase; nsHb; non-symbiotic hemoglobin; PMSF; phenylmethanesulphonyl fluoride; ROS; reactive oxygen species; TMBZ; tetramethylbenzidine; Rice; Oryza sativa; Gramineae; Function; Hemoglobin; Hydrogen peroxide; Non-symbi
Ectopic expression of rice Xa21 overcomes developmentally controlled resistance to Xanthomonas oryzae pv. oryzae
Keywords: Oryza sativa; Pathogen-associated molecular pattern; Pattern recognition receptor; XA21; Xanthomonas oryzae pv. oryzae
Effect of salinity on yield and 2-acetyl-1-pyrroline content in the grains of three fragrant rice cultivars (Oryza sativa L.) in Camargue (France)
Keywords: Oryza sativa; Fragrant rice; Aromatic quality; 2-Acetyl-1-pyrroline; Yield components; Salinity
Studies on the early development of zygotic and synergid embryo and endosperm in polyembryonic rice ApIII
Keywords: Apogamy; Oryza sativa; Polyembryony; Polyembryonic rice; Synergid embryo; Zygotic embryo
Key factors affecting Fe density in Fe-fortified-parboiled rice: Parboiling conditions, storage duration, external Fe-loading rate and genotypic differences
Keywords: Oryza sativa; Rice; Fe fortification; Fe-EDTA; Parboiled rice; Enriched rice
Fed-batch cultivation of transgenic rice cells for the production of hCTLA4Ig using concentrated amino acids
Keywords: Fed-batch culture; hCTLA4Ig; Transgenic plant cell culture; RAmy3D promoter; Oryza sativa;
Temporary drought can selectively suppress Schoenoplectus mucronatus in rice
Keywords: Schoenoplectus mucronatus; Oryza sativa; Organic rice; Drought; Water potential; Chlorophyll fluorescence; δ13C; Rooting depth; Root biomass
The carotenoid dioxygenase gene family in maize, sorghum, and rice
Keywords: Carotenoid cleavage dioxygenases; Zea mays; Oryza sativa; Sorghum bicolor; Apocarotenoids; Provitamin A; Abscisic acid
Sequence variation at the rice blast resistance gene Pi-km locus: Implications for the development of allele specific markers
Keywords: Oryza sativa; Magnaporthe oryzae; Blast disease; Resistance gene; Molecular marker
Identification of novel stress-regulated microRNAs from Oryza sativa L.
Keywords: miRNA, microRNA; bp, base pairs; GC, guanine-cytosine; PCR, polymerase chain reaction; UTL, untranslated region; MPSS, massively parallel signature sequencingmicroRNA; Oryza sativa; Stress
Plant characteristics associated with weed competitiveness of rice under upland and lowland conditions in West Africa
Keywords: Interspecific hybrid; Oryza sativa; Oryza glaberrima; Growth vigor; Screening; Selection criteria; Weed-suppressive ability;
Modelling of water and nitrogen balances in the ponded water and soil profile of rice fields in Northern Greece
Keywords: Soil nitrogen; Rice evapotranspiration; Flooded field; Oryza sativa; Lowland fields; Simulation; Nitrogen uptake
Ectopic expression of rice OsNCED3 in Arabidopsis increases ABA level and alters leaf morphology
Keywords: Abscisic acid (ABA); Arabidopsis thaliana; 9-cis-Epoxycarotenoid dioxygenase (NCED); Oryza sativa; Seed dormancy; Drought tolerance
Contrasted effect of biochar and earthworms on rice growth and resource allocation in different soils
Keywords: Ecological engineering; Oryza sativa; Plant growth; Earthworm; Pontoscolex corethrurus; Resource allocation; Shoot/root ratio; Biochar; Nitrogen
Addressing current and future problems of parasitic weeds in rice
Keywords: Striga hermonthica; Striga asiatica; Striga aspera; Striga forbesii; Rhamphicarpa fistulosa; Buchnera hispida; Oryza sativa; Oryza glaberrima; Weed management; Subsistence farming; Sub-Saharan Africa
Expansin gene expression and anoxic coleoptile elongation in rice cultivars
Keywords: EXLA, expansin-like A; EXLB, expansin-like B; EXPA, α-expansins; EXPB, β-expansins; FDR, false discovery rate; qPCR, real-time quantitative PCRAnoxia; Coleoptile; Expansin; Rice; Oryza sativa
Overexpression of a NAC transcription factor enhances rice drought and salt tolerance
Keywords: Abiotic stress; Drought; Salt; Transcriptional activator; Oryza sativa
Synthesis and biological activity of brassinosteroids fluorinated at C-2
Keywords: Brassinosteroids; Fluorinated steroids; Oryza sativa
Rice caryopsis structure in relation to distribution of micronutrients (iron, zinc, β-carotene) of rice cultivars including transgenic indica rice
Keywords: Caryopsis structure; HPLC analysis; Micronutrients distribution; Oryza sativa; Transgenics
Heavy metal-regulated new microRNAs from rice
Keywords: Oryza sativa; Heavy metal; MicroRNA; Target gene
Molecular basis for cytokinin biosynthesis
Keywords: Agrobacterium tumefaciens; Arabidopsis thaliana; Oryza sativa; Cytokinins; Adenosine phosphate-isopentenyltransferase; Cytochrome P450 monooxygenase; LOG;
Response of lowland rice to agronomic management under different hydrological regimes in an inland valley of Ivory Coast
Keywords: N use efficiency; Oryza sativa; Weeds; West Africa
Genome-wide survey and expression profiling of heat shock proteins and heat shock factors revealed overlapped and stress specific response under abiotic stresses in rice
Keywords: Oryza sativa; Microarray; Heat shock; Expression profile; Abiotic stress
Subspecies-specific intron length polymorphism markers reveal clear genetic differentiation in common wild rice (Oryza rufipogon L.) in relation to the domestication of cultivated rice (O. sativa L.)
Keywords: Oryza sativa; Oryza rufipogon; evolution; SSILP marker
Expression patterns of defence genes and antioxidant defence responses in a rice variety that is resistant to leaf blast but susceptible to neck blast
Keywords: Stage resistance; Oryza sativa; Magnaporthe oryzae; Defence gene; Antioxidant enzyme; MalondialdehydeAPR, adult plant resistance; CAT, catalase; CHS, chalcone synthase; Cht, chitinase; DPI, days post-inoculation; Gns, β-glucanase; GR, glutathione reductas
Weed competitiveness of the lowland rice varieties of NERICA in the southern Guinea Savanna
Keywords: Oryza sativa; Oryza glaberrima; Weed competition; Yield loss; Weed suppressive ability (WSA); West Africa;
Rice-Specific Mitochondrial Iron-Regulated Gene (MIR) Plays an Important Role in Iron Homeostasis
Keywords: Fe-deficiency-regulated gene; Fe homeostasis; mitochondria; Oryza sativa
Comparative analyses of distributions and functions of Z-DNA in Arabidopsis and rice
Keywords: Z-DNA; Monocotyledon; Dicotyledon; GC composition; Arabidopsis; Oryza sativa; Transcription regulation
Mitochondrial proteome during salt stress-induced programmed cell death in rice
Keywords: Oryza sativa; Programmed cell death; Proteomics; Mitochondria; Salt stress; Heat shock protein 70;
Nitric oxide alleviates arsenic toxicity by reducing oxidative damage in the roots of Oryza sativa (rice)
Keywords: Arsenic toxicity; Antioxidant enzymes; Nitric oxide; Oryza sativa; Oxidative stress; Reactive oxygen species; Stress amelioration