Keywords: پل دوم; BPS; bathophenanthroline disulfonic acid disodium; ChIP; chromatin immunoprecipitation; ER; endoplasmic reticulum; FA; fatty acid; FAS; ferrous ammonium sulfate; Pol II; polymerase II; OD; optical density; RT-qPCR; Reverse Transcription-quantitative real
مقالات ISI پل دوم (ترجمه نشده)
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Keywords: پل دوم; EMBL; European Molecular Biology Laboratory; Pol II; RNA polymerase II; cryo-EM; cryo-electron microscopy; integrated structural biology; gene transcription; RNA polymerase II; multiprotein complex; history of molecular biology;
Keywords: پل دوم; MLFq; myelodysplasia/myeloid leukemia factor; NPM; nucleophosmin; TSS; transcription start site; Pol II; RNA polymerase II; Hsc70; heat shock cognate protein; Hsp70; heat shock protein 70; NEF; nucleotide exchange factor; BAG2; BCL2-associated anthanogene
Keywords: پل دوم; Pol II; RNA polymerase II; H3Ac; acetylated histone H3; H4Ac; acetylated histone H4; H3K9Me3; trimethylated histone 3 at lysine 9 residues; H3K27Me3; trimethylated histone 3 at lysine 27 residues; H3K36Me3; trimethylated histone 3 at lysine 36 residues; H
Keywords: پل دوم; HR; histone residue; NUC; nucleosome; PTM; post-translational modification; CM; chromatin modifier; TF; transcription factor; NFR; nucleosome-free region; TSS; transcription start site; KS; Kolmogorov-Smirnov; HAT; histone acetyltransferase; HDAC; histo
Keywords: پل دوم; GnRH neurons; Kisspeptin neurons; Female puberty; Chromatin modifications; DNA methylation; Transcriptional repression; Transcriptional activation; Epigenetic regulators; microRNAs; Long noncoding RNAs; 5hmC; 5-hydroxymethylcytosine; 5-mC; 5-methylcytosin
Keywords: پل دوم; 4-HPR; N-(4-hydroxyphenyl)retinamide; 5â²-UTR; 5â²-untranslated region; 9-cis-RA; 9-cis retinoic acid; 9cUAB30; (2E,4E,6Z,8E)-8-(3â²,4â²-dihydro-1â²(2'H)-naphthalen-1â²-ylidene)-3,7-dimethyl-2,4,6-octatrienoic acid; Acitretin; (2E,4E,6E,8E)-9-(4-met
Keywords: پل دوم; H2BK12ac; acetylated histone H2B at Lys12; H3K36me3; tri-methylated histone H3 at Lys36; H3K4me1; mono-methylated histone H3 at Lys4; H3K4me2; di-methylated histone H3 at Lys4; H3K4me3; tri-methylated histone H3 at Lys4; H3K79me1; mono-methylated histone
JH6 downstream intronic sequence is dispensable for RNA polymerase II accumulation and somatic hypermutation of the variable gene in Ramos cells
Keywords: پل دوم; AID; activation-induced deaminase; Pol II; RNA polymerase II; SHM; somatic hypermutation; Immunoglobulin; Variable gene; Somatic hypermutation; RNA polymerase II;
High MITF Expression Is Associated with Super-Enhancers and Suppressed by CDK7 Inhibition in Melanoma
Keywords: پل دوم; ChIP-seq; chromatin immunoprecipitation sequencing; CTD; carboxy-terminal domain; GI50; concentration at which half maximal inhibition of cell proliferation is achieved; GSEA; gene set enrichment analysis; MITF-hi; high MITF expression level; MITF-lo; low
Circular RNA and its mechanisms in disease: From the bench to the clinic
Keywords: پل دوم; circRNAs; circular RNAs; miRNAs; microRNAs; RBPs; RNA-binding proteins; pre-mRNAs; precursor mRNAs; ecircRNAs; exonic circular RNAs; ciRNAs; circular intronic RNAs; EIciRNAs; exon-intron circular RNAs; tricRNA; tRNA intronic circular RNA; MBL; Muscleblind
Selective degradation of BET proteins with dBET1, a proteolysis-targeting chimera, potently reduces pro-inflammatory responses in lipopolysaccharide-activated microglia
Keywords: پل دوم; BET proteins; Inflammation; Microglia; dBET1; Lipopolysaccharide; BET; bromodomain and extraterminal proteins; LPS; lipopolysaccharide; BRD; bromodomain-containing protein; TBS; Tris-buffered saline; TBST; Tris-buffered saline with 0.1% Tween® 20; COX-2;
Control the intracellular NF-κB activity by a sensor consisting of miRNA and decoy
Keywords: پل دوم; NF-κB; nuclear factor κB; miRNA; microRNA; amiRNA; artificial microRNA; RNAi; RNA interference; shRNA; small hairpin RNA; siRNA; small interfering RNA; RISC; RNA-induced silencing complex; dsRNA; double-stranded RNA; Pol II; RNA Polymerase II; Pol III;
Meeting report for Odd Pols 2016: Ann Arbor 2.0
Keywords: پل دوم; FGFR2; FGF Receptor-2; hESCs; human embryonic stem cells; lncRNAs; long noncoding RNAs; NORs; Nucleolus Organizer Regions; RdDM; RNA-directed DNA Methylation; Pol I; RNA polymerase I; Pol II; RNA polymerase II; Pol III; RNA polymerase III; Pol IV; RNA pol
The human tRNA-modifying protein, TRIT1, forms amyloid fibers in vitro
Keywords: پل دوم; tRNA; transfer ribonucleic acid; TRIT1; tRNA isopentenyl transferase; DMAPP; dimethylallyl pyrophosphate; tgm silencing; tRNA gene mediate silencing; IPTase; tRNA isopentenyl transferase; ThT; thioflavin T; CR; Congo red; pol II; RNA polymerase II; pol II
RNA polymerase II pausing and transcriptional regulation of the HSP70 expression
Keywords: پل دوم; HSP; heat shock protein; HSF1; heat shock factor 1; Pol II; RNA polymerase II; UPR; unfolded protein response; HSE; heat shock element; P-TEFb; positive transcription elongation factor b; PARP; poly(ADP)-ribose polymerase; PAF1; polymerase associated fact
R-Loop Depletion by Over-expressed RNase H1 in Mouse B Cells Increases Activation-Induced Deaminase Access to the Transcribed Strand without Altering Frequency of Isotype Switching
Keywords: پل دوم; R-loops; somatic hypermutation; class switch recombination; RNase H1; transgenic mouse; CSR; class switch recombination; SHM; somatic hypermutation; Tg; transgenic; TCR; T-cell receptor; LPS; lipopolysaccharide; IL4; interleukin 4; pol II; polymerase II;
Selective expression of the transcription elongation factor ELL3 in B cells prior to ELL2 drives proliferation and survival
Keywords: پل دوم; ELL; Eleven-nineteen Lysine-rich leukemia; Pol II; RNA polymerase II; SEC; super elongation complex; ELL3; Transcription elongation; B-cell; Proliferation; Lymphoma;
smFRET experiments of the RNA polymerase II transcription initiation complex
Keywords: پل دوم; Single-molecule; RNA polymerase II; Pol II; Protein labeling; smFRET; Promoter open complex;
PIC Activation through Functional Interplay between Mediator and TFIIH
Keywords: پل دوم; Pol II; RNA polymerase II; GTF; general transcription factor; PIC; preinitiation complex; MS; mass spectrometry; CTD; carboxy terminal domain; EM; electron microscopy; GTF; general transcription factor; ML; major late; EMSA; electrophoretic mobility assay
ReviewImaging Transcriptional Regulation of Eukaryotic mRNA Genes: Advances and Outlook
Keywords: پل دوم; Pol II; RNA polymerase II; TF; transcription factor; TBP; TATA-binding protein; TAF; TBP-associated factor; GTF; general transcription factor; PIC; transcription preinitiation complex; CTD; C-terminal domain; ncRNA; non-coding RNA; eRNA; enhancer RNA; FRA
Structural insights into RNA synthesis by the influenza virus transcription-replication machine
Keywords: پل دوم; cRNA; complementary RNA; CTD; C-terminal domain of Pol II; Pol II; cellular RNA polymerase II; RNP; ribonucleoprotein particles; vRNA; viral genomic RNA; Influenza polymerase; RNA synthesis; Replication; Transcription; Cap-snatching; Pol II C-terminal dom
Hypoxic inhibition of JMJD3 reduces H3K27me3 demethylation and induction of the STAT6 target gene CCL18
Keywords: پل دوم; C/EBPβ; CCAAT/enhancer binding protein (C/EBP), beta; c-myc; MYC = v-myc avian myelocytomatosis viral oncogene homolog; CBP; CREBBP = CREB binding protein; CCL18; chemokine (CC motif) ligand 18 (pulmonary and activation-regulated); CHX; cycloheximid;
MTA1 regulates higher-order chromatin structure and histone H1-chromatin interaction in-vivo
Keywords: پل دوم; MTA1; Chromatin; Histone H1; in-vivo; Nucleosome remodeling and histone deacetylation complex (NuRD); MTA1; metastasis-associated gene 1; NuRD; nucleosome remodeling and histone deacetylase; NRL; nucleosome repeat length; HATs; histone acetyltransferases;
IL-10 disrupts the Brd4-docking sites to inhibit LPS-induced CXCL8 and TNF-α expression in monocytes: Implications for chronic obstructive pulmonary disease
Keywords: پل دوم; IL-10; CXCL8; TNF-α; histone deacetylase 2; chronic obstructive pulmonary disease; transcriptional inhibition; Brd4-docking site; nuclear factor κB; AcK310p65; Acetylated lysine 310 residue of NF-κBp65; ARF; Acute respiratory failure; CBP; CREB-binding
MYC and metabolism on the path to cancer
Keywords: پل دوم; 2-DG; 2-deoxyglucose; 4E-BP; eIF4E-binding protein; 5,10-methylene THF; 5,10-methylenetetrahydrofolate; ACC; acetyl-CoA carboxylase; ACLY; ATP-citrate lyase; AMPK; AMP-activated protein kinase; ATP; adenosine triphosphate; ChIP-seq; chromatin immunoprecip
Profiling microRNAs and their targets in an important fleshy fruit: Tomato (Solanum lycopersicum)
Keywords: پل دوم; aly; Arabidopsis lyrata; ath; Arabidopsis thaliana; bdi; Brachypodium distachyon; BLAST; Basic Local Alignment Search Tool; dbEST; Database of EST; DCL1; Dicer-like Enzyme1; ESTs; Expressed Sequence Tags; gma; Glycine max; MFE; Minimum Free Energy; MIR; M
Reversine induces multipotency of lineage-committed cells through epigenetic silencing of miR-133a
Keywords: پل دوم; ADM; adipogenic differentiation medium; ALP; alkaline phosphatase; miRNA; microRNA; MEF2; myocyte enhancer factor 2; MRF; muscle regulatory factor; ODM; osteogenic differentiation medium; Pol II; RNA polymerase II; SRF; serum response factor; Reversine; m
Targeting the nucleolus for cancer intervention
Keywords: پل دوم; DDR, DNA Damage Response; DSB, Double Stranded Break; IR, Ionizing Radiation; NAD, Nucleolus Associated Domain; NCL, Nucleolin; NOR, Nucleolar Organizer Region; NPM, Nucleophosmin; PIC, Pre-Initiation Complex; Pol I, DNA-dependent RNA Polymerase I; Pol II
TET enzymatic oxidation of 5-methylcytosine, 5-hydroxymethylcytosine and 5-formylcytosine
Keywords: پل دوم; α-KG; α-ketoglutarate; AML; acute myeloid leukemia; APOBEC; apolipoprotein B mRNA-editing enzyme complex; ARP; aldehyde reactive probe; β-GT; β-glucosyl transferase; 5-caC; 5-carboxylcytosine; 5-cadCyd; 5-carboxyl-2â²-deoxycytidine; C; cytosine; C5-M
H19 inhibits RNA polymerase II-mediated transcription by disrupting the hnRNP U-actin complex
Keywords: پل دوم; HCC; hepatocellular carcinoma; Pol II; polymerase II; CTD; C-terminal domain; ncRNAs; noncoding RNAs; hnRNP; heterogeneous nuclear ribonucleoprotein; RIP; RNA immunoprecipitation; EU; 5-ethynyl uridine; IP; immunoprecipitation; Rpb1; RNA polymerase II sub
Single-molecule studies of RNAPII elongation
Keywords: پل دوم; Pol II; Transcript elongation; Single-molecule;
Comparative aspects of polyglutamine binding domain in PQBP-1 among Vertebrata
Keywords: پل دوم; polyQ; polyglutamine; PQBP-1; polyglutamine binding protein-1; polyAA; homopolymeric amino acid; PRD; polar amino acid rich domain; NLS; nuclear localization signal; CTD; C-terminal domain; 7aa repeat; seven amino acid repeat; snRNP; small nuclear ribonuc
Identification of methylation-dependent regulatory elements for intergenic miRNAs in human H4 cells
Keywords: پل دوم; DMPs; differentially methylated probes; DMRs; differentially methylated regions; DAC; 5-aza-2-deoxycitidine; pol II; RNA polymerase II; pol III; RNA polymerase III; pri-miRNA; primary miRNA; Intergenic microRNA; DNA methylation; Regulatory element;
Nuclear import of the influenza A virus transcriptional machinery
Keywords: پل دوم; NLS; nuclear localisation signal; NP; nucleoprotein; NPC; nuclear pore complex; PA; acidic polymerase subunit; PB1; basic polymerase subunit 1; PB2; basic polymerase subunit 2; Pol II; DNA-dependent RNA polymerase II; RanBP5; Ran binding protein 5; RNP; r
Short CommunicationDeep sequencing analysis of small non-coding RNAs reveals the diversity of microRNAs and piRNAs in the human epididymis
Keywords: پل دوم; AMV; avian myeloblastosis virus; cDNA; DNA complementary to RNA; miRNA; microRNA; nt; nucleotide; PAGE; PA-gel electrophoresis; PCR; polymerase chain reaction; piRNA; Piwi-interacting RNA; Pol II; RNA polymerase II enzyme; Pol III; RNA polymerase III enzy
Role of damage-specific DNA polymerases in M13 phage mutagenesis induced by a major lipid peroxidation product trans-4-hydroxy-2-nonenal
Keywords: پل دوم; trans-4-Hydroxy-2-nonenal; HNE-DNA adducts; Mutations; NER; DNA repair; M13 phage SOS-dependent mutations; Pol II, Pol IV and Pol V; EH; 2,3-epoxy-4-hydroxynonanal; HNE; trans-4-hydroxy-2-nonenal; IPTG; isopropyl-β-d-thiogalactopyranoside; LPO; lipid per
Nuclear export as a key arbiter of “mRNA identity” in eukaryotes
Keywords: پل دوم; ALREX; (Alternative mRNA Export); CBC; (Cap Binding Complex); CTD; (Carboxy-Terminal Domain); EJC; (Exon Junction Complex); mRNP; (Messenger Ribonucleoprotein); MSCR; (Mitochondrial Targeting Sequence Coding Region); NPC; (Nuclear Pore Complex); Pol II; (
Nhp6: A small but powerful effector of chromatin structure in Saccharomyces cerevisiae
Keywords: پل دوم; HMGB; Chromatin; Nucleosome; Pol II; Pol III; TBP; TFIIA; TFIIB; FACT; Spt16; Pob3; Swi/Snf; Rsc
A streamlined method for rapid and sensitive chromatin immunoprecipitation
Keywords: پل دوم; ChIP; chomatin immunoprecipitation; H3; histone 3; Pol II; RNA polymerase 2; Ab; antibody; cad; carbamoylphosphate synthetase/aspartate carbamyltransferase/dihydroorotase gene; TEA; T early alpha promoter; Rag; Recombination activating gene; TCR; T cell r
Functional dissection of an IFN-α/β receptor 1 promoter variant that confers higher risk to chronic hepatitis B virus infection
Keywords: پل دوم; SNPs; single nucleotide polymorphisms; IFNAR1; IFN-α/β receptor 1; HMGB1; High mobility group B protein 1; PARP-1; poly(ADP-ribose) transferase-1; EMSAs; electrophoretic mobility shift assays; ChIP; chromatin immunoprecipitation; 3-AB; 3-Aminobenzamide;
Polytene chromosome squash methods for studying transcription and epigenetic chromatin modification in Drosophila using antibodies
Keywords: پل دوم; Pol II; Polytene squash preparations; Transcription; Chromatin structure; Antibody labeling; Fixation conditions; Drosophila
Yeast Elc1 plays an important role in global genomic repair but not in transcription coupled repair
Keywords: پل دوم; NER; nucleotide excision repair; TCR; transcription coupled repair; GGR; global genomic repair; Pol II; RNA polymerase II; Elc1; Nucleotide excision repair; Rad7; Rad16; Rad26; Rpb9; Saccharomyces cerevisiae;
DNA based molecular motors
Keywords: پل دوم; 82.35.Lr; 82.37.Np; 82.37.Rs; 82.39.Pj; 87.15.HSingle-molecule; Optical tweezers; RNA polymerase; Molecular motor; DNA packaging; DNA overstretching; Pol II; Backteriophage
Translesion synthesis in Escherichia coli: Lessons from the NarI mutation hot spot
Keywords: پل دوم; Escherichia coli; NarI; DNA; Pol II; Pol III; Pol V; RecA; Beta-clamp; TLS; Polymerase switching
The case for 8,5â²-cyclopurine-2â²-deoxynucleosides as endogenous DNA lesions that cause neurodegeneration in xeroderma pigmentosum
Keywords: پل دوم; DNA repair; Parkinson's disease; transcription; dopamine; cockayne syndrome; DeSanctis-Cacchione syndrome; BER; base excision repair; CS; Cockayne syndrome; CSF; cerebrospinal fluid; cyclo-dA; 8,5â²-cyclo-2â²-deoxyadenosine; Cyclopurine-deoxynucleosid
Interplay Among Replicative and Specialized DNA Polymerases Determines Failure or Success of Translesion Synthesis Pathways
Keywords: پل دوم; AAF, N-2-acetylaminofluorene; SSB, single-stranded binding protein; ssDNA, single-stranded DNAlesion bypass; Pol III; Pol V; Pol II; polymerase switches during TLS
Construction and analysis of Leishmania tarentolae transgenic strains free of selection markers
Keywords: پل دوم; APRT; adenine phosphoribosyltransferase; BLE; gene encoding for phleomycin binding protein; CAM A; calmodulin A gene; CAM IR; calmodulin intergenic region; EGFP; gene encoding for enhanced green fluorescent protein; HYG; hygromycin resistance gene; IR; in
TNF-α-induced NF-κB/RelA Ser276 phosphorylation and enhanceosome formation is mediated by an ROS-dependent PKAc pathway
Keywords: پل دوم; CBP/p300; CREB binding protein/300Â kDa E1a binding protein; ChIP; chromatin immunoprecipitation; GAPDH; Glyceraldehyde phospho-dehydrogenase; DMSO; Dimethyl sulfoxide; IL-8; interleukin-8; MSK-1; mitogen and stress activated kinase-1; NAC; N-Acetyl cyste
Signaling mechanisms in progesterone-neurotransmitter interactions
Keywords: پل دوم; progesterone receptors; ligand-independent activation; signaling; reproductive behavior; protein kinases; dopamine; AF; transcription activation function; CBP; CREB-binding protein; CREB; cyclic AMP responsive element binding protein; DA; dopamine; DARPP-