Impact of light-exposure on the metabolite balance of transgenic potato tubers with modified glycoalkaloid biosynthesis

• Metabolome examined in light-exposed transgenic potato with low α-solanine.
• No light effect on α-solanine in transgenic line; α-chaconine increased.
• Tissue type and light treatment effects have bigger impact than transgenesis.

Metabolite profiling (liquid chromatography–mass spectrometry (LC–MS) and gas chromatography (GC–MS)) was used to assess the impact of light on the composition of transgenic potato (Solanum tuberosum L. cv. Desirée) with reduced glycoalkaloid content via the down-regulation of the SGT1 gene. Transgenic tubers exhibited an almost complete knock-out of α-solanine production and light had little impact on its accumulation. Levels of α-chaconine increased significantly in the peel of both the control and transgenic lines when exposed to light, particularly in the transgenic line. Major differences in metabolite profiles existed between outer and inner tuber tissues, and between light and dark-treated tubers. Many of the light-induced changes are explicable in terms of pathways known to be affected by stress responses. The impact of transgenesis on profiles was much less than that of tissue type or light and most differences were explicable in terms of the modification to the glycoalkaloid pathway.