کد مقاله | کد نشریه | سال انتشار | مقاله انگلیسی | نسخه تمام متن |
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1360883 | 981451 | 2008 | 10 صفحه PDF | دانلود رایگان |
Investigating prototypical interactions between NT(8–13) and the human neurotensin receptor 1 (hNTR1), we created a receptor–ligand model that was validated by site-directed mutagenesis and structure–activity relationship studies. Stabilization of the extracellular loop 1 (EL1) by π-stacking clusters proved to be important for agonist binding when substitution of six conserved amino acids by alanine resulted in an agonist specific loss of maximal binding capacity. In agreement with our modeling studies, EL1 seems to adopt a clamp-type border area controlling the shape of the binding site crevice. Employing chemically manipulated peptide analogs as molecular probes, the impact of backbone modifications on receptor–ligand interaction, especially the influence on ligand conformation, was examined in binding studies and explained by in silico analysis.
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Journal: Bioorganic & Medicinal Chemistry - Volume 16, Issue 20, 15 October 2008, Pages 9359–9368