کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
503506 863773 2007 8 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Pathfinder: A parallel search algorithm for concerted atomistic events
موضوعات مرتبط
مهندسی و علوم پایه شیمی شیمی تئوریک و عملی
پیش نمایش صفحه اول مقاله
Pathfinder: A parallel search algorithm for concerted atomistic events
چکیده انگلیسی

An algorithm has been designed to search for the escape paths with the lowest activation barriers when starting from a local minimum-energy configuration of a many-atom system. The pathfinder algorithm combines: (1) a steered eigenvector-following method that guides a constrained escape from the convex region and subsequently climbs to a transition state tangentially to the eigenvector corresponding to the lowest negative Hessian eigenvalue; (2) discrete abstraction of the atomic configuration to systematically enumerate concerted events as linear combinations of atomistic events; (3) evolutionary control of the population dynamics of low activation-barrier events; and (4) hybrid task + spatial decompositions to implement massive search for complex events on parallel computers. The program exhibits good scalability on parallel computers and has been used to study concerted bond-breaking events in the fracture of alumina.

ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Computer Physics Communications - Volume 176, Issue 4, 15 February 2007, Pages 292–299
نویسندگان
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