کد مقاله | کد نشریه | سال انتشار | مقاله انگلیسی | نسخه تمام متن |
---|---|---|---|---|
5589355 | 1569828 | 2017 | 7 صفحه PDF | دانلود رایگان |
عنوان انگلیسی مقاله ISI
Identification and characterization of novel microRNAs for fruit development and quality in hot pepper (Capsicum annuum L.)
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کلمات کلیدی
DAAKOGClusters of Orthologous Groups of proteinsArgonaute - آرگونوتDeep sequencing - ترتیب عمیقFruit development - توسعه میوهRISC - خطرKEGG یا Kyoto Encyclopedia of Genes and Genomes - دایرة المعارف ژن ها و ژنوم کیوتو Kyoto Encyclopedia of Genes and Genomes - دایره المعارف ژنتیک ژن ها و ژنوم کیوتوdays after anthesis - روز بعد از آنتی ژنCapsicum annuum - سیب زمینیRNA-Induced Silencing Complex - مجتمع خاموش کننده RNA inducedMiRNA - میکروRNA، ریزآرانای، miRNAGene ontology - هستیشناسی ژنیAGO - پیشFruit quality - کیفیت میوه
موضوعات مرتبط
علوم زیستی و بیوفناوری
بیوشیمی، ژنتیک و زیست شناسی مولکولی
ژنتیک
پیش نمایش صفحه اول مقاله
چکیده انگلیسی
MicroRNAs (miRNAs) are non-coding small RNAs which play an important regulatory role in various biological processes. Previous studies have reported that miRNAs are involved in fruit development in model plants. However, the miRNAs related to fruit development and quality in hot pepper (Capsicum annuum L.) remains unknown. In this study, small RNA populations from different fruit ripening stages and different varieties were compared using next-generation sequencing technology. Totally, 59 known miRNAs and 310 novel miRNAs were identified from four libraries using miRDeep2 software. For these novel miRNAs, 656 targets were predicted and 402 of them were annotated. GO analysis and KEGG pathways suggested that some of the predicted miRNAs targeted genes involved in starch sucrose metabolism and amino sugar as well as nucleotide sugar metabolism. Quantitative RT-PCR validated the contrasting expression patterns between several miRNAs and their target genes. These results will provide an important foundation for future studies on the regulation of miRNAs involved in fruit development and quality.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Gene - Volume 608, 15 April 2017, Pages 66-72
Journal: Gene - Volume 608, 15 April 2017, Pages 66-72
نویسندگان
Zhoubin Liu, Yuping Zhang, Lijun Ou, Linyu Kang, Yuhua Liu, Junheng Lv, Ge Wei, Bozhi Yang, Sha Yang, Wenchao Chen, Xiongze Dai, Xuefeng Li, Shudong Zhou, Zhuqing Zhang, Yanqing Ma, Xuexiao Zou,