کد مقاله | کد نشریه | سال انتشار | مقاله انگلیسی | نسخه تمام متن |
---|---|---|---|---|
9591215 | 1507010 | 2005 | 5 صفحه PDF | دانلود رایگان |
عنوان انگلیسی مقاله ISI
Pathway of the conformational transitions in flexible molecules
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کلمات کلیدی
موضوعات مرتبط
مهندسی و علوم پایه
شیمی
شیمی تئوریک و عملی
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چکیده انگلیسی
The pathways of the conformational transitions in flexible molecular systems were studied by the DDRP (Dynamically Determined Reaction Path) method implemented in TINKER molecular modelling package. Our first model systems were conformational transitions in small organic molecules (determination of rotational transitions, boat-chair transitions, etc.). The method was found to be very effective in finding such transitions and the location of the transition state. In comparison with other methods (modified Elber and Czerminski (EC) method implemented also in TINKER), similar results were obtained. For the conformational change of di- and small peptide fragments also acceptable paths and barriers were obtained. To determine the conformational transition in large peptides (i.e. folding), the effectivity of the procedure demands further studies.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Journal of Molecular Structure: THEOCHEM - Volume 725, Issues 1â3, 11 July 2005, Pages 145-149
Journal: Journal of Molecular Structure: THEOCHEM - Volume 725, Issues 1â3, 11 July 2005, Pages 145-149
نویسندگان
T. Körtvélyesi, L.L. Stachó, Gy. Dömötör, B. Jójárt, M.I. Bán,