Keywords: ساختار ثانویه RNA; Particle swarm optimization; Minimum free energy; Hydrogen bond model; Nearest neighbor database; Combinatorial optimization; RNA secondary structure
مقالات ISI ساختار ثانویه RNA (ترجمه نشده)
مقالات زیر هنوز به فارسی ترجمه نشده اند.
در صورتی که به ترجمه آماده هر یک از مقالات زیر نیاز داشته باشید، می توانید سفارش دهید تا مترجمان با تجربه این مجموعه در اسرع وقت آن را برای شما ترجمه نمایند.
در صورتی که به ترجمه آماده هر یک از مقالات زیر نیاز داشته باشید، می توانید سفارش دهید تا مترجمان با تجربه این مجموعه در اسرع وقت آن را برای شما ترجمه نمایند.
A method to improve prediction of secondary structure for large single RNA sequences
Keywords: ساختار ثانویه RNA; RNA; RNA secondary structure; Large single RNA; Kinetic folding; Bioinformatics; Computational biology;
Adventures with RNA graphs
Keywords: ساختار ثانویه RNA; RNA structure; Graphs; Coarse-grained modeling; RNA secondary structure; Mathematical biology; RNA design;
Recent advances in RNA folding
Keywords: ساختار ثانویه RNA; RNA secondary structure; RNA constraint folding; RNA interactions; RNA secondary structure comparison; RNA analysis;
A combined sequence and structure based method for discovering enriched motifs in RNA from in vivo binding data
Keywords: ساختار ثانویه RNA; RNA binding proteins; RNA sequence and structure motifs; RNA secondary structure; Motif enrichment; Computational ranked based approach; CLIP-seq; SMARTIV;
Consensus RNA Secondary Structure Prediction Based on Support Vector Machine Classification
Keywords: ساختار ثانویه RNA; comparative sequences analysis; RNA secondary structure; support vector machine; similarity weight factor;
RNAcompete-S: Combined RNA sequence/structure preferences for RNA binding proteins derived from a single-step in vitro selection
Keywords: ساختار ثانویه RNA; RNA-binding protein; Motif scanning; RNA secondary structure; Motif discovery; High-throughput sequencing; In vitro selection;
Multi-objective two-level swarm intelligence approach for multiple RNA sequence-structure alignment
Keywords: ساختار ثانویه RNA; Multi-objective optimization; RNA secondary structure; Multiple sequence alignment; Particle swarm optimization; Non-dominated solutions; Pareto optimal solution; Minimum free energy; Conflicting objectives;
Search for 5â²-leader regulatory RNA structures based on gene annotation aided by the RiboGap database
Keywords: ساختار ثانویه RNA; ncRNA; Bioinformatics; GraphClust; Infernal; Rfam; RNA secondary structure; Riboswitch; Methyltransferase; TRAP; CsrA; RsmA;
RNA Regulations and Functions Decoded by Transcriptome-wide RNA Structure Probing
Keywords: ساختار ثانویه RNA; RNA structure probing; RNA structurome; RNA secondary structure; Structure-function relationship; RNA regulation;
Comparative analysis of variation and selection in the HCV genome
Keywords: ساختار ثانویه RNA; HCV; Genome; Selection; RNA secondary structure; Epitope;
Using temperature effects to predict the interactions between two RNAs
Keywords: ساختار ثانویه RNA; RNAâRNA interaction; RNA secondary structure; Minimum free energy;
Computational analysis of RNA structures with chemical probing data
Keywords: ساختار ثانویه RNA; RNA secondary structure; RNA tertiary structure; chemical probing; parallel sequencing
Bioinformatics of cardiovascular miRNA biology
Keywords: ساختار ثانویه RNA; MiRNAs; Multiple sequence alignment; RNA secondary structure; Database; Omics; Heart;
SHAPE analysis of the RNA secondary structure of the Mouse Hepatitis Virus 5' untranslated region and N-terminal nsp1 coding sequences
Keywords: ساختار ثانویه RNA; Mouse Hepatitis Virus; Murine coronavirus; Betacoronavirus; RNA secondary structure; SHAPE analysis; 5â² cis-acting region;
The structure and functions of coronavirus genomic 3â² and 5â² ends
Keywords: ساختار ثانویه RNA; Coronaviruses; RNA secondary structure; cis-Acting sequences; Virus replication; RNA binding proteins;
RNA secondary structure prediction based on SHAPE data in helix regions
Keywords: ساختار ثانویه RNA; Minimum free energy; RNA secondary structure; SHAPE data;
A semi-supervised learning approach for RNA secondary structure prediction
Keywords: ساختار ثانویه RNA; 00-01; 99-00; RNA secondary structure; Semi-supervised learning; Parameter learning;
Sub-genomic RNA of defective interfering (D.I.) dengue viral particles is replicated in the same manner as full length genomes
Keywords: ساختار ثانویه RNA; Dengue virus; Defective interfering particles; Replication; RNA secondary structure; Disease attenuation;
The structural and phylogenetic profile of the 3′ terminus of coxsackievirus B3 negative strand
Keywords: ساختار ثانویه RNA; CV-B3, coxsackievirus B3; UTR, untranslated region; DMS, dimethyl sulfate; PV-1, poliovirus type 1; HCV, hepatitis C virusCoxsackievirus B3; Cloverleaf; RNA secondary structure; RNA structure probing; Negative-strand RNA; Negative viral strand
A circular order on edge-coloured trees and RNA m-diagrams
Keywords: ساختار ثانویه RNA; primary, 05C05, 05A15; secondary, 37B10Tree; Edge-coloured; Labelled triangulation; Fuss–Catalan number; Enumeration; Tree of relations; RNA secondary structure; Polygon; m-Angulation; Induction; Interval exchange transformation; RNA m-diagram
Functional analysis of the stem loop S3 and S4 structures in the coronavirus 3â²UTR
Keywords: ساختار ثانویه RNA; Coronavirus; Cis-acting elements; 3â²UTR; RNA secondary structure; MHV; Mutation; Reverse genetics;
Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants
Keywords: ساختار ثانویه RNA; dsRNase; double-stranded RNase; ssRNase; single-stranded RNase; miRNA; microRNA; PIP-seq; protein interaction profile sequencing; siRNA; small interfering RNA; PARS; parallel analysis of RNA structure; RNA secondary structure; RNA-binding proteins; Post-t
Generation of RNA pseudoknot structures with topological genus filtration
Keywords: ساختار ثانویه RNA; RNA secondary structure; RNA pseudoknot structure; Topological surface; Topological genus; Partition function; Sampling;
Targeting long non-coding RNAs in cancers: Progress and prospects
Keywords: ساختار ثانویه RNA; ANRIL; antisense non-coding RNA in the INK4 locus; ATRA; all-trans retinoic acid; ASO; antisense oligonucleotide; CRC; colorectal carcinoma; CREB; cAMP-responsive element binding protein; DM1; myotonic dystrophy type 1; DsRNA; double-stranded RNA; EMT; ep
RNA structure and dynamics: A base pairing perspective
Keywords: ساختار ثانویه RNA; Non-canonical base pair; RNA secondary structure; Structural characterization of non-canonical base pairs; Detection of non-canonical base pairs;
Identification, molecular characterization, and evolution of group I introns at the expansion segment D11 of 28S rDNA in Rhizoctonia species
Keywords: ساختار ثانویه RNA; Anamorph; LSU rDNA; Phytopathogenic fungi; RNA secondary structure; Thanatephorus;
Information-theoretic uncertainty of SCFG-modeled folding space of the non-coding RNA
Keywords: ساختار ثانویه RNA; RNA secondary structure; Stochastic context-free grammars; Structural entropy; Riboswitch; Structural ambiguity
On topological indices for small RNA graphs
Keywords: ساختار ثانویه RNA; RNA secondary structure; RNA graph representation; Laplacian eigenvalues; Small RNA graphs
A heuristic approach to RNA–RNA interaction prediction
Keywords: ساختار ثانویه RNA; RNA secondary structure; Minimum free energy
Identification of the HIV-1 packaging RNA sequence (Ψ) as a major determinant for the translation inhibition conferred by the HIV-1 5′ UTR
Keywords: ساختار ثانویه RNA; HIV-1 5′ UTR; RNA secondary structure; Psi (Ψ); Translation inhibition
Molecular phylogenetics of Oestroidea (Diptera: Calyptratae) with emphasis on Calliphoridae: Insights into the inter-familial relationships and additional evidence for paraphyly among blowflies
Keywords: ساختار ثانویه RNA; Oestroidea; Calliphoridae; Mesembrinellinae; Data partitioning strategies; RNA secondary structure;
Comparative structural studies of bovine viral diarrhea virus IRES RNA
Keywords: ساختار ثانویه RNA; BVDV; IRES RNA; Comparative Sequence Analysis; RNA secondary structure; RNA model;
Drosha processing controls the specificity and efficiency of global microRNA expression
Keywords: ساختار ثانویه RNA; miRNA, microRNA; pri-miRNA, primary microRNA transcriptmiRNA; Pri-miRNA processing; Drosha; miRNA expression; RNA secondary structure
In vivo generated Citrus exocortis viroid progeny variants display a range of phenotypes with altered levels of replication, systemic accumulation and pathogenicity
Keywords: ساختار ثانویه RNA; Viroid RNA evolution; Population composition; Genomic diversity; Infectivity; RNA secondary structure; Citrus protoplasts; ‘Etrog’ citron; Gynura; Chrysanthemum
Motif frequency and evolutionary search times in RNA populations
Keywords: ساختار ثانویه RNA; Genotype–phenotype map; RNA secondary structure; RNA world
Combinatorial analysis of interacting RNA molecules
Keywords: ساختار ثانویه RNA; RNA-RNA interaction; Joint structure; Shape; Symbolic enumeration; Singularity analysis; RNA secondary structure;
A folding “framework structure” of Tetrahymena group I intron
Keywords: ساختار ثانویه RNA; Ribozyme; Splice site; Dynamic extended folding; RNA secondary structure
Parallelization and optimization of Mfold on shared memory system
Keywords: ساختار ثانویه RNA; RNA secondary structure; Mfold; Parallelization; Optimization; MPI; Shared memory system
Structural plasticity of Barley yellow dwarf virus-like cap-independent translation elements in four genera of plant viral RNAs
Keywords: ساختار ثانویه RNA; RNA secondary structure; Cap-independent translation; Luteovirus; Umbravirus; Necrovirus; Dianthovirus; Selective 2′-hydroxyl acylation and primer extension; GNRNA pentaloop; 3′ Untranslated region
Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta)
Keywords: ساختار ثانویه RNA; Actin; Asterochloris; Complementary base changes (CBC); Cryptic diversity; Doublet model; ITS rDNA; Lichen photobionts; Likelihood mapping; RNA secondary structure; Substitutional saturation; Taxonomy; Trebouxiophyceae
RNA pseudoknot structures with arc-length ≥3≥3 and stack-length ≥σ≥σ
Keywords: ساختار ثانویه RNA; RNA secondary structure; Pseudoknot; Enumeration; Generating function
Group-specific structural features of the 5â²-proximal sequences of coronavirus genomic RNAs
Keywords: ساختار ثانویه RNA; Coronavirus; SARS-CoV; RNA secondary structure; Packaging signal; 5â² Untranslated region;
Non-synonymous gene polymorphisms in the secretory signal peptide of human TGF-β1 affect cellular synthesis but not secretion of TGF-β1
Keywords: ساختار ثانویه RNA; TGF-β1; Cytokine; Cellular secretion; Gene polymorphism; RNA secondary structure; Transfection; Hepatic fibrogenesis; LX-2; CHO; Fibrosis
Computational modeling analyses of RNA secondary structures and phylogenetic inference of evolutionary conserved 5S rRNA in the prokaryotes
Keywords: ساختار ثانویه RNA; Bacteria; 5S rRNA; Phylogeny; RNA secondary structure; Free energy; Evolution
Fine mapping of interactions between eEF1α protein and 3â²UTR of metallothionein-1 mRNA
Keywords: ساختار ثانویه RNA; Metallothionein-1; Perinuclear mRNA localisation; 3â²Untranslated region; Elongation factor 1α; RNA binding protein; RNA secondary structure; Histidine-tRNA ligase;
RNA secondary structure, permutations, and statistics
Keywords: ساختار ثانویه RNA; RNA secondary structure; Combinatorial statistics; Permutations; Pattern avoidance
Clinical relevance of the 2â²-5â²-oligoadenylate synthetase/RNase L system for treatment response in chronic hepatitis C
Keywords: ساختار ثانویه RNA; HCV; hepatitis C virus; IFN-α; interferon-α; 2â²-5â²-OAS; 2â²-5â²-oligoadenylate synthetase; SR; sustained virologic response: negative HCV RNA at the end of treatment and 24 weeks thereafter; ETR; end of treatment response:negative HCV RNA at t
The 5′UTR-specific mutation in VEEV TC-83 genome has a strong effect on RNA replication and subgenomic RNA synthesis, but not on translation of the encoded proteins
Keywords: ساختار ثانویه RNA; Alphavirus; 5′UTR; Attenuating mutation; RNA secondary structure; NMR; Virus replication; RNA synthesis
Bridging IRES elements in mRNAs to the eukaryotic translation apparatus
Keywords: ساختار ثانویه RNA; Internal ribosome entry site (IRES); Cap-independent translation; Eukaryotic translation; IRES trans-acting factor (ITAF); RNA secondary structure;