Keywords: NRVM; neonatal rat ventricular cardiomyocytes; smFISH; Single Molecule Fluorescent In-Situ Hybridization; CV; coefficient of variability; OPP; O-propargyl-puromcyin; AHA; l-azidohomoalaine; scRT-qPCR; single-cell quantitative polymerase chain reaction w
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Discovery and characterization of conserved and novel microRNAs from blunt snout bream (Megalobrama amblycephala) by deep sequencing
Keywords: nt; Nucleotides; UTRs; 3â² untranslated regions; RISC; RNA-induced silencing complex; pri-miRNAs; Primary miRNAs; pre-miRNAs; precursor miRNAs; LPS; Lipopolysaccharide; GO; Gene ontology; KEGG; Kyoto Encyclopedia of Genes and Genomes; NCBI; National Cent
The tumor suppressive miR-26a regulation of FBXO11 inhibits proliferation, migration and invasion of hepatocellular carcinoma cells
Keywords: HCC; hepatocellular carcinoma; miRNAs; microRNAs; UTRs; untranslated regions; ST3GAL6; ST3 beta-galactoside alpha-2,3-sialyltransferase 6; FBXO11; F-box protein 11; PRMT9; protein arginine methyltransferase 9; AJCC; American Joint Committee on Cancer; qRT
Interferon induced Mx protein from Indian snow trout Schizothorax richardsonii (Gray) lacks critical functional features unlike its mammalian homologues
Keywords: ISGs; interferon stimulated genes; GED; GTPase effector domain; ORF; open reading frame; BSE; bundle signaling element; Poly (I:C); polyinosinic:polycytidylic acid; UTRs; untranslated regions; Schizothorax richardsonii; Interferon stimulated genes; Mx pro
miR-143 and miR-145 promote hypoxia-induced proliferation and migration of pulmonary arterial smooth muscle cells through regulating ABCA1 expression
Keywords: PASMCs; pulmonary artery smooth muscle cells; PAH; pulmonary arterial hypertension; ABCA1; ATP-binding cassette transporter A1; RIP; RNA immunoprecipitation; UTRs; untranslational regions; VSMCs; vascular smooth muscle cells; CCK-8; Cell Counting Kit-8; m
Dysregulation of NRXN1 by mutant MIR8485 leads to calcium overload in pre-synapses inducing neurodegeneration in Multiple sclerosis
Keywords: miR-8485; NRXN1; UTRs; Multiple sclerosis; Calcium homeostasis; Neurodegeneration;
MicroRNA-202-5p functions as a tumor suppressor in colorectal carcinoma by directly targeting SMARCC1
Keywords: miRNAs; microRNAs; CRC; colorectal carcinoma; SMARCC1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1; miR-202-5p; hsa-miRNA-202-5p; UTRs; untranslated regions; EMT; Epithelial-Mesenchymal Transition; OS; o
Genome-wide in silico analysis of dehydrins in Sorghum bicolor, Setaria italica and Zea mays and quantitative analysis of dehydrin gene expressions under abiotic stresses in Sorghum bicolor
Keywords: Abiotic stress; DHNs; Phosphorylation sites; qRT-PCR; Sorghum; YnS sub group; ABRE; abscisic acid-responsive elements; CK; casein kinase; DHNs; dehydrins; DRE; drought-responsive elements; HSE; heat shock-responsive elements; IDP; intrinsically disordered
Protective effect of dioscin against intestinal ischemia/reperfusion injury via adjusting miR-351-5p-mediated oxidative stress
Keywords: II/R; intestinal ischemia-reperfusion; H/R; hypoxia-reoxygenation; IPC; ischemia-reperfusion precondition; IPO; ischemia-reperfusion post-conditioning; DIC; diffuse intravascular coagulation; SIRS; systemic inflammatory response syndrome; MODS; multiple o
Molecular cloning and expression analysis of five heat shock protein 70 (HSP70) family members in Lateolabrax maculatus with Vibrio harveyi infection
Keywords: HSP70; Lateolabrax maculatus; Expression pattern; Immune response; Vibrio harveyi; HSP; heat shock protein; HSC; heat shock cognate; HSPa4; heat shock protein 70Â kDa 4-like; HSPa14; heat shock protein 70Â kDa 14-like; PBS; phosphate-buffered saline; RACE
Carotenoid profiling, in silico analysis and transcript profiling of miRNAs targeting carotenoid biosynthetic pathway genes in different developmental tissues of tomato
Keywords: Carotenoid; MicroRNA; Regulation; RT-PCR; Tomato; Transcription factors; BS; Breaker; IG; Immature Green; MG; Mature Green; miRNAs; MicroRNAs; nt; nucleotides; psRNATarget; Plant Small RNA Target; RR; Red ripe; RT- qPCR; reverse transcription-quantita
Nucleolin promotes in vitro translation of feline calicivirus genomic RNA
Keywords: FCV; Translation; Nucleolin; AGRO100; Aptamer; RNA virus; UTRs;
Global regulation of alternative RNA splicing by the SR-rich protein RBM39
Keywords: ULM; U2AF ligand motif; snRNPs; small nuclear ribonucleoproteins; SR; serine/arginine-rich; RRMs; RNA-recognition motifs; RS domain; arginine- and serine-rich domain; VEGF; vascular endothelial growth factor; PNK; polynucleotide kinase; RPKM; reads per ki
Identification and analysis of HSP70 from Sepiella maindroni under stress of Vibrio harveyi and Cd2Â +
Keywords: HSP70; heat shock protein 70; HSPs; heat shock proteins; SmHSP70; heat shock protein 70 of Sepiella maindroni; CST; critical solution temperature; RACE; rapid amplification of cDNA ends; ORF; open reading frame; UTRs; untranslated regions; Sepiella maindr
Dimerization model of the C-terminal RNA Recognition Motif of HuR
Keywords: AREs; Adenylate and uridylate Rich Elements; BD; Brownian Dynamics; COM; center of mass; ELAV; Embryonic Lethal and Abnormal Vision; Grb7; Growth factor receptor-bound protein 7; HuR; Human antigen R; mRNA; messenger RNA; MD; Molecular Dynamics; NMR; nucl
Exchange protein directly activated by cAMP encoded by the mammalian rapgef3 gene: Structure, function and therapeutics
Keywords: 3D lrECM; three-dimensional cultures of laminin-rich extracellular matrix; ACs; adenylyl cyclases; AKAP; A-kinase anchoring protein; ATP; adenosine triphosphate; β-AR; β adrenergic receptor; β-arr2; β-arrestin 2; BnT; benzylthio group; cAB; cAMP-bindi
The global transcriptional landscape of Bacillus amyloliquefaciens XH7 and high-throughput screening of strong promoters based on RNA-seq data
Keywords: RNA-seq; RNA sequencing; TSSs; transcriptional start sites; RPKM; reads per kilobase of transcripts per million mapped reads; UTRs; untranslated regions; PGPR; plant growth-promoting rhizobacterium; CDSs; protein-coding sequences; CGMCC; China General Mic
Construction of infectious cDNA clone derived from a classical swine fever virus field isolate in BAC vector using in vitro overlap extension PCR and recombination
Keywords: BAC; bacterial artificial chromosome; CSFV; classical swine fever virus; FAT; fluorescent antibody test; UTRs; un-translated regions; ORF; open reading frame; PK15; Porcine kidney cells; RT-PCR; reverse transcriptase PCR; vRNA; viral RNA; Classical swine
Molecular characterization and expression analysis of the complement factor I (CpFI) in the whitespotted bamboo shark (Chiloscyllium plagiosum)
Keywords: Complement; Factor I; Regulatory protein; Shark; Chiloscyllium plagiosum; FI; complement factor I; CpFI; factor I of Chiloscyllium plagiosum (whitespotted bamboo shark); LP; leader peptide; FIMAC; factor I/ membrane attack complex domain; SRCR; scavenger
MicroRNA-224 is involved in the regulation of mouse cumulus expansion by targeting Ptx3
Keywords: miRNAs; microRNAs; Ptx3; pentraxin 3; UTRs; untranslated regions; CL; corpus luteum; DMSO; dimethylsulfoxide; PND; postnatal day; eCG; equine chorionic gonadotropin; hCG; human chorionic gonadotropin; ELISA; enzyme-linked immunosorbent assay; GCs; granulo
ReviewTherapeutic vaccines against hepatitis C virus
Keywords: HCV; hepatitis C virus; SoC; standard-of-care; DAAs; direct-acting antiviral agents; NAb; neutralising antibody; UTRs; untranslated regions; SR-BI; scavenger receptor class B type I; OCLN; tight-junction proteins occludin; CLDN-1; claudin-1; LDL-R; low de
Malignant transformation of colonic epithelial cells by a colon-derived long noncoding RNA
Keywords: lncRNAs; long non-coding RNAs; ncNRFR; non-coding Nras functional RNA; PCC; progenitor cell compartment; ISH; in situ hybridization; UTRs; untranslated regions; YAMC; Young adult mouse colon; PCR; polymerase chain reaction; dpc; days postcoitus; aRNA; amp
Abundant sequence divergence in the native Japanese cattle Mishima-Ushi (Bos taurus) detected using whole-genome sequencing
Keywords: mtDNA; mitochondrial DNA; BACs; bacterial artificial chromosomes; SNPs; single-nucleotide polymorphisms; indels; insertions and deletions; UTRs; untranslated regions; PCR; polymerase chain reaction; nsSNPs; non-synonymous SNPs; GO; gene ontology; QTL; qua
Prolonged fasting activates hypoxia inducible factors-1α, -2α and -3α in a tissue-specific manner in northern elephant seal pups
Keywords: ARNT; Aryl-hydrocarbon receptor nuclear translocator; bHLH; Basic helix-loop-helix; C-TAD; Carboxyl-terminal transactivation domain; GAPDH; Glyceraldehyde 3-phosphate dehydrogenase; HIFs; Hypoxia inducible factors; HREs; Hypoxia-responsive elements; I
Identification of reproduction-related genes and SSR-markers through expressed sequence tags analysis of a monsoon breeding carp rohu, Labeo rohita (Hamilton)
Keywords: ESTs; Expressed sequence tags; cDNA; Complementary DNA; CIFA; Central Institute of Freshwater Aquaculture; DSN; Duplex-specific nuclease; BLAST; Basic Local Alignment Search Tool; NR; Non-redundant; GO; Gene ontology; KEGG; Kyoto Encyclopedia of Genes and
In silico identification of conserved intercoding sequences in Leishmania genomes: Unraveling putative cis-regulatory elements
Keywords: CICS; conserved intercoding sequence; UTR; untranslated regions; ORF; open reading frame; CDS; coding DNA sequence; SIDER; short interspersed degenerated retroposon; DIRE; degenerated ingi-related element; GO; gene ontology; OCG; orthologous candidates in
Retention of a new-defined intron changes pharmacology and kinetics of the full-length P2X2 receptor found in myenteric neurons of the guinea pig
Keywords: ATP; P2X2 receptors; Alternative splicing; Intron retention; Myenteric neurons; Guinea pig; P2x2 gene; α,β-meATP; α,β-methylene ATP; IATP; ATP-induced currents; PPADS; pyridoxalphophate-6-azophenyl-2â²,4â²-disulphonic acid; UTRs; untranslated region
Genetic defects in Portuguese families with inherited protein C deficiency
Keywords: PC; protein C; PS; protein S; FVa; activated factor V; FVIIIa; activated factor VIII; APC; activated PC; PROC; PC gene; VTE; venous thromboembolism; Se; secondary; Sp; spontaneous; UTRs; untranslated regions; SSCP; single-strand conformation polymorphism;
MicroRNA-146a is linked to pain-related pathophysiology of osteoarthritis
Keywords: OA; osteoarthritis; RA; rheumatoid arthritis; DRG; dorsal root ganglia; MMP; matrix metalloproteinase; ADAMTS; a disintegrin and metalloproteinase with thrombospondin motifs; UTRs; untranslated regions; TLR; Toll-like receptor; NFkB; nuclear factor-kappa
JKTBP1 Is Involved in Stabilization and IRES-Dependent Translation of NRF mRNAs by Binding to 5′ and 3′ Untranslated Regions
Keywords: JKTBP1; NRF; UTRs; RNA stability; AREUTR, untranslated region; IRES, internal ribosome entry site; NRF, NFκB-repressing factor; JKTBP, JKT-binding protein or heterogeneous nuclear ribonucleoprotein D-like protein; RBD, RNA binding domain; GST, glutathione
The 5′ untranslated region of the FAD3 mRNA is required for its translational enhancement at low temperature in Arabidopsis roots
Keywords: FAD3; UTRs; Low temperature; Translational regulation
An efficient computational method for screening functional SNPs in plants
Keywords: Functional analysis; Computational; In silico screening; Waxy protein; Ns coding; Non-synonymous coding; UTRs; Untranslated regions; TF; Transcriptional factors; TFBS; Transcriptional factor binding site;
Simple repeat evolution includes dramatic primary sequence changes that conserve folding potential
Keywords: Short tandem repeats; STR replacements; Secondary structure preservation; Simple repeats; Microsatellites; Evolution; Non-coding sequences; UTRs;
Pisum sativum contains a factor with strong homology to eIF5B
Keywords: pfu; plaque forming unit; UTRs; untranslated regions; eIF; eukaryotic translation initiation factor; tRNAfMet; formyl methionine specific transfer RNA.; IF2; GTP-binding domain; EF-Tu-D2; Phylogenetic tree;
Characterization of different expression patterns of calsarcin-1 and calsarcin-2 in porcine muscle
Keywords: QTL; quantitative trait loci; ORF; open reading frame; UTRs; untranslated regions; RFLP; restriction fragment length polymorphism; SINEs; short interspersed nucleotide elements; PCR; polymerase chain reaction; RT-PCR; PCR after reverse transcription; RFLP
Virus-inducible reporter genes as a tool for detecting and quantifying influenza A virus replication
Keywords: BHK-21; baby hamster kidney cells; DMEM; Dulbecco's modified Eagle's medium; FBS; fetal bovine serum; FluA; influenza A virus; GFP; green fluorescent protein; h; hours; hpi; hours post-infection; IC50; 50% inhibitory concentration; LAC; La Crosse virus; l