Co-optimizing application partitioning and network topology for a reconfigurable interconnect

• We give an algorithm to compute topologies of reconfigurable interconnect systems.
• We optimize, for reconfigurable networks, topology, routing, and task partitioning.
• We compute a high-throughput seed topology from structural properties of the task.

To realize the full potential of a high-performance computing system with a reconfigurable interconnect, there is a need to design algorithms for computing a topology that will allow for a high-throughput load distribution, while simultaneously partitioning the computational task graph of the application for the computed topology. In this paper, we propose a new framework that exploits such reconfigurable interconnects to achieve these interdependent goals, i.e., to iteratively co-optimize the network topology configuration, application partitioning and network flow routing to maximize throughput for a given application. We also present a novel way of computing a high-throughput initial topology based on the structural properties of the application to seed our co-optimizing framework. We show the value of our approach on synthetic graphs that emulate the key characteristics of a class of stream computing applications that require high throughput. Our experiments show that the proposed technique is fast and computes high-quality partitions of such graphs for a broad range of hardware parameters that varies the bottleneck from computation to communication. Finally, we show how using a particular topology as a seed to our framework significantly reduces the time to compute the final topology.