کد مقاله کد نشریه سال انتشار مقاله انگلیسی نسخه تمام متن
502194 863688 2016 10 صفحه PDF دانلود رایگان
عنوان انگلیسی مقاله ISI
Efficient parallelization of analytic bond-order potentials for large-scale atomistic simulations
ترجمه فارسی عنوان
مقادیر موثر از پتانسیل تحلیلی اوراق قرضه برای شبیه سازی های اتمیستی در مقیاس بزرگ
موضوعات مرتبط
مهندسی و علوم پایه شیمی شیمی تئوریک و عملی
چکیده انگلیسی

Analytic bond-order potentials (BOPs) provide a way to compute atomistic properties with controllable accuracy. For large-scale computations of heterogeneous compounds at the atomistic level, both the computational efficiency and memory demand of BOP implementations have to be optimized. Since the evaluation of BOPs is a local operation within a finite environment, the parallelization concepts known from short-range interacting particle simulations can be applied to improve the performance of these simulations. In this work, several efficient parallelization methods for BOPs that use three-dimensional domain decomposition schemes are described. The schemes are implemented into the bond-order potential code BOPfox, and their performance is measured in a series of benchmarks. Systems of up to several millions of atoms are simulated on a high performance computing system, and parallel scaling is demonstrated for up to thousands of processors.

ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Computer Physics Communications - Volume 204, July 2016, Pages 64–73
نویسندگان
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