Keywords: تابع مولکولی; BP; biological process; CC; cellular component; DAVID; database for annotation, visualization and integrated discovery; DEGs; differentially expressed genes; ES; effect size; GEO; gene expression omnibus; GO; gene ontology; INMEX; integrative meta-analysi
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Keywords: تابع مولکولی; Gene Ontology(GO); Dissimilarity measure; Symmetry-based distance; Gene clustering; Gene-GO term annotation matrix; Multi-objective clustering; MOO; Multi-Objective Optimization; SOO; Single-Objective Optimization; AMOSA; Archived Multi-Objective Simulate
Keywords: تابع مولکولی; α-Syn; α-synuclein; AD; Alzheimer's disease; BP; Biological Process; CAMS; Chinese Academy of Medical Sciences; CAPS; calcium-dependent activator of secretion; CC; Cellular component; CCK; Cell counting kit; DA; dopamine; DAVID; Database for annotation,
Keywords: تابع مولکولی; Cytosinpeptidemycin; SRBSDV; Plant resistance; Label-free proteomic; RT-qPCR; Enzymatic activity; SRBSDV; Southern rice black-streaked dwarf virus; WBPH; white-backed planthopper; ABA; abscisic acid; DTT; dithiothreitol; FDR; alse discovery rate; GO; Gene
Keywords: تابع مولکولی; PCOS; polycystic ovary syndrome; DEGs; differentially expressed genes; PPI; protein-protein interaction; POLR1B; polymerase I subunit B; POLE3; polymerase epsilon 3, accessory subunit; POLD3; polymerase delta 3, accessory subunit; HTR2C; 5âhydroxytrypta
Keywords: تابع مولکولی; GE; Gene Expression; MRMR; Maximum Relevance and Minimum Redundancy; CA; Classification Accuracy; Boot-MRMR; Bootstrap-MRMR; MCDM; Multiple Criteria Decision Making; SVM-RFE; Support Vector Machine- Recursive Feature Elimination; RF; Random Forest; FC; Fo
Keywords: تابع مولکولی; Simulation; Molecular function; Dynamics; Forcefield; Database;
Keywords: تابع مولکولی; BP; biological processes; CC; cellular components; CSF1; colony stimulating factor; Csf1R; colony stimulating factor 1 receptor; DGE; digital gene expression; GO; gene ontology; KEGG; Kyoto Encyclopedia of Genes and Genomes; MCP-1; monocyte chemotactic pr
Keywords: تابع مولکولی; Bp; biological process; DAO-db; Disease Association Ontology for diabetes; GO; Gene Ontology; HITS; Hyperlink Induced Topic Search; Mf; molecular function; MeSH; Medical Subject Headings; OWL; Web Ontology Language; PPI; protein-protein interactions; RDF;
Keywords: تابع مولکولی; BP; biological process; ChIP; Chromatin immunoprecipitation; DMEM; Dulbecco's modified Eagle's medium; EB; embryoid bodies; EGFP; enhanced green fluorescence protein; ESC; Embryonic stem cells; FCS; fetal calf serum; GO; gene ontology; IMDM; Iscove's modi
Keywords: تابع مولکولی; Asthma; Gibbs sampling; Molecular function; Markov chain; Pathway enrichment analysis;
Transcriptomics reveals tissue/organ-specific differences in gene expression in the starfish Patiria pectinifera
Keywords: تابع مولکولی; BW; body wall; CE; coelomic epithelium; TF; tube feet; SM; stomach; PC; pyloric caeca; GN; gonad; BUSCO; Benchmarking Universal Single-Copy Orthologs; KOG; EuKaryotic Orthologous Groups; ORFs; open reading frames; NR; non-redundant; GO; gene ontology; KEG
Identification of NMU as a potential gene conferring alectinib resistance in non-small cell lung cancer based on bioinformatics analyses
Keywords: تابع مولکولی; NSCLC; non-small cell lung cancer; ALK; anaplastic lymphoma kinase; GEO; gene expression omnibus; DEGs; differentially expressed genes; DAVID; database for annotation, visualization and integrated discovery; GO; gene ontology; KEGG; kyoto encyclopedia of
De novo assembly and functional annotations of the transcriptome of Metorchis orientalis (trematoda: Opisthorchiidae)
Keywords: تابع مولکولی; Metorchis orientalis; Transcriptome; De novo; Next-generation sequencing; M. orientalis; Metorchis orientalis; C. sinensis; Clonorchis sinensis; S. mansoni; Schistosoma mansoni; S. japonicum; Schistosoma japonicum; O felineus; Opisthorchis felineus; O
Transcriptional response of oil palm (Elaeis guineensis Jacq.) inoculated simultaneously with both Ganoderma boninense and Trichoderma harzianum
Keywords: تابع مولکولی; Ganoderma; Global gene expression; Induced resistance; Oil palm; Trichoderma; ACC-1; aminocyclopropane-1-carboxylate; BP; biological process; BSR; basal stem rot; CC; cellular compartment; COI; coronatine-insensitive 1; DEGs; differentially expressed gene
Transcriptional profiling of the ductus arteriosus: Comparison of rodent microarrays and human RNA sequencing
Keywords: تابع مولکولی; Ao; aorta; DEG; differentially expressed gene; bioDBnet; biological Database network; BP; biological process; CC; cellular component; DAVID; database for annotation, visualization, and integrated discovery; ECM; extracellular matrix; FDR; false discovery
Corn gluten hydrolysate regulates the expressions of antioxidant defense and ROS metabolism relevant genes in H2O2-induced HepG2 cells
Keywords: تابع مولکولی; Corn gluten meal; Peptide; Reactive oxygen species; Antioxidant gene; HepG2 cells; ALOX; arachidonate lipoxygenase; BP; biological process; CC; cellular component; CGH; corn gluten hydrolysate; CGH1; corn gluten hydrolysate with molecular weight <1 kDa; C
Investigation of miR-136-5p key target genes and pathways in lung squamous cell cancer based on TCGA database and bioinformatics analysis
Keywords: تابع مولکولی; LUSC; lung squamous cell cancer; TCGA; the Cancer Genome Atlas; GTEx; genotype-tissue expression; UGT1A1; UDP glucuronosyltransferase family 1 member A1; UGT1A3; UDP glucuronosyltransferase family 1 member A3 UGT1A6 UDP glucuronosyltransferase family 1 me
Global gene expression analysis of knockdown Triosephosphate isomerase (TPI) gene in human gastric cancer cell line MGC-803
Keywords: تابع مولکولی; TPI; triosephosphate isomerase; GC; gastric cancer; DEGs; differentially expressed genes; PPI; protein-protein interaction; G3P; glyceraldehyde 3-phosphate; DHAP; dihydroxyacetone phosphate; RT-qPCR; reverse transcription-quantitative polymerase chain rea
Expression profiles and functional annotation analysis of mRNAs in suprachiasmatic nucleus of Clock mutant mice
Keywords: تابع مولکولی; Avp; vasopressin; Avpr1a; vasopressin 1a receptor; BD; bipolar disorder; BP; biological processes; CC; cell component; DEGs; differentially expressed genes; FCA; fold change absolute; Gabra2; gamma-aminobutyric acid receptor subunit alpha-2; Gata4; GATA b
Quantitative proteomics of Bombyx mori after BmNPV challenge
Keywords: تابع مولکولی; Silkworm; BmNPV; Quantitative proteomics; Molecular function; Biological process;
Genome-wide gene expression analysis of 45â¯days pregnant fetal cotyledons vis-a-vis non-pregnant caruncles in buffalo (Bubalus bubalis)
Keywords: تابع مولکولی; ART; assisted reproductive technologies; IFNT; interferon tau; OXTR; oxytocin receptors; TE; trophectoderm; CL; corpus luteum; PRP1; proline-rich protein BstNI; TKDP4; Trophoblast Kunitz domain protein 4; C-R length; crown to rump length; GEO; Gene Expres
FGF2 and FAM201A affect the development of osteonecrosis of the femoral head after femoral neck fracture
Keywords: تابع مولکولی; ONFH; osteonecrosis of the femoral head; FNF; femoral neck fracture; DEGs; differentially expressed genes; PPI; protein-protein interaction; VEGF; vascular endothelial growth factor; HIF-1α; hypoxia-inducible factor-1 alpha; OPG; osteoprotegerin; RANK; r
Differentially DNA methylation changes induced in vitro by traffic-derived nanoparticulate matter
Keywords: تابع مولکولی; nPM; nanoparticulate matter; PM; particulate matter; ROS; reactive oxygen species; HUVECs; human umbilical vein endothelial cells; DMP; differential methylated probes; GO; gene ontology; DMGs; differential methylated genes; KEGG; Kyoto encyclopedia of gen
RNA seq analysis of a novel fish pathogenic fungus, Fusarium oxysporum: In quest of unveiling the virulence factors associated with fish infection
Keywords: تابع مولکولی; GO; gene ontology; FOSC; Fusarium oxysporum species complex; MF; molecular function; CC; cellular component; BP; biological process; CBD; cellulose binding domains; CBM; carbohydrate binding modules; GH; glycoside hydrolases; SAP; secreted aspartic protea
Analysis of long non-coding RNA expression profiles using RNA sequencing in ovarian endometriosis
Keywords: تابع مولکولی; GO; Gene Ontology; BP; biological process; CC; cellular component; MF; molecular function; KEGG; Kyoto Encyclopedia of Genes and Genomes; CNC network; coding-non-coding gene co-expression network; CNCI; Coding-Non-Coding-Index; CPC; Coding Potential Calcu
Human PRDM2: Structure, function and pathophysiology
Keywords: تابع مولکولی; PRDM2/RIZ; Gene products; Molecular function; Estradiol; Human diseases; Cancer;
Up-regulation of YPEL1 and YPEL5 and down-regulation of ITGA2 in erlotinib-treated EGFR-mutant non-small cell lung cancer: A bioinformatic analysis
Keywords: تابع مولکولی; EGFR; epidermal growth factor receptor; NSCLC; non-small cell lung cancer; TKIs; tyrosine kinase inhibitors; GEO; Gene Expression Omnibus; PPI; protein-protein interaction; DEGs; differentially expressed genes; AXL; AXL Receptor Tyrosine Kinase; ZEB1; zin
Role of upregulated miR-136-5p in lung adenocarcinoma: A study of 1242 samples utilizing bioinformatics analysis
Keywords: تابع مولکولی; NSCLC; non small cell lung cancer; SCLC; small cell lung cancer; LUAD; lung adenocarcinoma; miRNAs; microRNAs; GO; Gene Ontology; KEGG; Kyoto Encyclopedia of Genes and Genomes; PANTHER; Protein Analysis Through Evolutionary Relationships; GEO; Gene Expres
Transcriptome sequencing of Paeonia suffruticosa 'Shima Nishiki' to identify differentially expressed genes mediating double-color formation
Keywords: تابع مولکولی; Transcriptome; Anthocyanins; P. suffruticosa 'Shima Nishiki'; Double-color; Differentially expressed genes (DEGs); HPLC; High-performance liquid chromatography; CHS; Chalcone synthase gene; CHI; Chalcone isomerase gene; F3H; Flavanone 3-hydroxylase ge
Transcriptional analysis identifies major pathways as response components to Sporisorium scitamineum stress in sugarcane
Keywords: تابع مولکولی; cDNA-AFLP; cDNA-amplified fragment length polymorphism; CHRK1; chitinase kinase receptor gene; STKs; serine/threonine protein kinase gene; RLK; receptor-like kinase; POD; peroxidase; SSH; suppression subtractive hybridization; ACO; 1-aminocyclopropane-1-c
A new miRNA regulator, miR-672, reduces cardiac hypertrophy by inhibiting JUN expression
Keywords: تابع مولکولی; PE; phenylephrine; AngII; angiotensin II; IGF1; insulin-like growth factor 1; JUN; Jun proto-oncogene product; miRNA; MicroRNA; UTR; untranslated region; NC; negative control miRNA; KEGG; Kyoto Encyclopedia of Genes and Genomes; GO_CC; GO cellular compone
Cross-species comparison of the gut: Differential gene expression sheds light on biological differences in closely related tenebrionids
Keywords: تابع مولکولی; Tenebrionid gut; Gut transcriptome; Tribolium castaneum; Tenebrio molitor; BP; Biological Process; CC; Cellular Component; CHK1; checkpoint kinase 1; HEX3; hexamerin 3; INDY; I'm not dead yet; GO; gene ontology; MF; molecular function; PPK28; pickpocket
Analysis of the acute response of Galleria mellonella larvae to potassium nitrate
Keywords: تابع مولکولی; BP; biological processes; EST; Expression Sequence Tag; FDR; False Discovery Rates; GDN; glyceryl dinitrate; GO; gene ontology terms; GTN; nitroglycerin; LD; lethal dose; MP; molecular function; MS; mass spec; PBS; Phosphate Buffer Saline; ROS; reactive o
Drug induces depression-like phenotypes and alters gene expression profiles in Drosophila
Keywords: تابع مولکولی; 5-HT; serotonin; BP; biological process; CC; cellular component; Con; control flies; CPZ; flies fed with 2000Â mg/L of Chlorpromazine for 48Â h; DEGs; differentially expressed genes; dscDNA; double-strand cDNA; FXS; Fragile X syndrome; GO; Gene ontology;
Genes directly regulated by NF-κB in human hepatocellular carcinoma HepG2
Keywords: تابع مولکولی; HCC; Hepatocellular carcinoma; TNFα; tumor necrosis factor α; LPS; lipopolysaccharide; PMA; phorbol myristate acetate; UV; virus and ultraviolet; TF; transcription factor; NF-κB; nuclear factor κB; HBV; hepatitis B virus; HCV; hepatitis C virus; DTGs;
GoFDR: A sequence alignment based method for predicting protein functions
Keywords: تابع مولکولی; GO; Gene Ontology; AA; amino acid; IEA; inferred from electronic evidence; RCA; inferred from reviewed computational analysis; BP; biological process; CC; cellular component; MF; molecular function; PSSM; position-specific score matrix; FDRs; functionally
Characterization and functional analysis of Trichinella spiralis Nudix hydrolase
Keywords: تابع مولکولی; Trichinella spiralis; Nudix hydrolases; Enzyme activity; Molecular function; Invasion;
iTRAQ-based proteomic analysis of combination therapy with taurine, epigallocatechin gallate, and genistein on carbon tetrachloride-induced liver fibrosis in rats
Keywords: تابع مولکولی; ALT; alanine aminotransferase; AST; aspartate transaminase; BP; biological process; CC; cellular component; CCl4; carbon tetrachloride; DAVID; database for annotation, visualization, and integrated discovery; ECM; extracellular matrix; EGCG; epigallocatec
Plasmodium falciparum complicated malaria: Modulation and connectivity between exportome and variant surface antigen gene families
Keywords: تابع مولکولی; PFU; Plasmodium falciparum uncomplicated isolates; PFC; P. falciparum complicated isolates; GO; gene ontology; BP; biological process; MF; molecular function; PfAQP; P. falciparum aquaglycoporin; PfEMP1; P. falciparum erythrocyte membrane protein 1; RIFIN
The role of microRNAs and long non-coding RNAs in the pathology, diagnosis, and management of melanoma
Keywords: تابع مولکولی; Noncoding RNAs; MicroRNAs; Melanoma; Molecular function
Analysis of central Hox protein types across bilaterian clades: On the diversification of central Hox proteins from an Antennapedia/Hox7-like protein
Keywords: تابع مولکولی; Hox proteins; Molecular function; Sequence similarity; Hox protein types; Antennapedia (Antp); Hox7
Systematic investigation of Amphioxus (Branchiostoma floridae) microRNAs
Keywords: تابع مولکولی; miRNA; microRNA; miRNA*; microRNA star; EST; expression sequence tags; GO; Gene ontology; UTR; untranslated regions; TLR; toll-like receptor; mRNA; message RNA; C; cellular component; P; biological process; F; molecular function; Amphioxus; MiRNA; Target
The utility of geometrical and chemical restraint information extracted from predicted ligand-binding sites in protein structure refinement
Keywords: تابع مولکولی; Ligand-binding site refinement; Protein threading; Protein structure prediction; Ligand-binding site prediction; Ensemble docking; Molecular function;
Toxicity evaluation of benzo[a]pyrene on the polychaete Perinereis nuntia using subtractive cDNA libraries
Keywords: تابع مولکولی; BaP; benzo[a]pyrene; Blastx; basic local alignment search tool; BP; biological process; CC; cellular component; CDC; cell division clycle; CYP; cytochrome P450; DMSO; dimethyl sulfoxide; EST; expressed sequence tag; GO; gene ontology; KEGG; kyoto Encyclop
Screening of the Metastasis-Associated Genes by Gene Chip in High Metastatic Human Ovarian Cancer Cell Lines
Keywords: تابع مولکولی; ovarian cancer cell line; metastatic associated gene; chromosomal localization; molecular function