Quantification of long chain polyunsaturated fatty acids by gas chromatography

The accurate and reproducible analysis of long-chain polyunsaturated fatty acids (PUFA) is of growing importance. Especially for labeling purposes, clear guidelines are needed in order to achieve optimum accuracy. Since calibration standards cannot be used for method validation due to the instability of PUFAs, there is no direct way to check for the absence of systematic errors. In this study the sources of error that weaken the accuracy were evaluated using theoretical considerations and calibration standards with corrected composition. It was demonstrated that the key role for optimum accuracy lies in the optimization of the split injection system. Even when following the instructions outlined in the official methods of the American Oil Chemist's Society (AOCS), systematic errors of more than 7% can arise. Clear guidelines regarding system calibration and selection of appropriate internal standards (IS) can improve precision and accuracy significantly.