PDB

در این صفحه تعداد 1356 مقاله تخصصی درباره که در نشریه های معتبر علمی و پایگاه ساینس دایرکت (Science Direct) منتشر شده، نمایش داده شده است. برخی از این مقالات، پیش تر به زبان فارسی ترجمه شده اند که با مراجعه به هر یک از آنها، می توانید متن کامل مقاله انگلیسی همراه با ترجمه فارسی آن را دریافت فرمایید.
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Elsevier - ScienceDirect - الزویر - ساینس دایرکت
Keywords: Bisbenzimidazole derivatives; Specific inhibitors of the trypsin-like sites; Constitutive proteasome; Immunoproteasome; In silico docking; c20S; 20S constitutive proteasome catalytic core; cChT-L (β5c subunit); chymotrypsin-like; cT-L (β2c subunit); try
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Keywords: GAD; Glutamate decarboxylase; CaM1; calmodulin isoform 1 from Arabidopsis thaliana; GABA; γ-aminobutyric acid; PLP; pyridoxal 5′-phosphate; PDB; Protein Data Bank; Kd; dissociation constant; SEC; size exclusion chromatography; FPLC; fast protein liquid
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Keywords: PRMT; protein arginine methyltransferase; SAM; S-adenosyl-l-methionine; SAH; S-adenosyl-l-homocysteine; SFG; sinefungin; PDB; Protein Data Bank; rmsd; root square mean deviation; ESI-MS; electrospray ionization mass spectrometry; LC-MS/MS; liquid chroma
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Keywords: 2′-O-meNTP; 2′-O-methylribonucleoside triphosphates; aa; amino acid; CBM; cellulose binding module; CBM™; combinatorial beneficial mutagenesis; CGTase; cyclodextrin glycosyltransferase; CODH; carbon monoxide dehydrogenase; CSAT; combinatorial active
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Keywords: APx; ascorbate peroxidase; CcP; cytochrome c peroxidase; Cld; chlorite dismutase; DyP; dye-decolorizing peroxidase; EPO; eosinophil peroxidase; HGT; horizontal gene transfer; HRP; horseradish peroxidase; KatG; catalase-peroxidase; LDS; linoleate diol sy
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Keywords: MRSA; Methicillin Resistant S. aureus; KEGG; Kyoto Encyclopedia of Genes and Genomes; PDB; Protein Databank; BLAST; Basic Local Alignment Search Tool; NCBI-GI; NCBI Gene Identification Number; MDR; Multiple Drug Resistant; TB; Tuberculosis; MTB; Mycobacte
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Keywords: ADCC; antibody-dependent cellular cytotoxicity; CDC; complement-dependent cytolysis; CDR; complementarity determining region; Fab; fragment antigen binding; H; antibody heavy chain; L; antibody light chain; Le; Lewis glycan epitope; PDB; protein data bank
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Keywords: Structure-based drug discovery; Homology modeling; Ligand docking; Virtual screening; Protein flexibility; Active site water molecules; GPCR; G Protein-coupled receptor; HM; homology modeling; HTD; high-throughput docking; LSHM; Ligand-steered homology mo
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Keywords: Blue Copper Proteins; Azurin; Rusticyanin; Rack/entatic; Cancer therapy; AADH; amine dehydrogenase; Am; amicyanin; Az; azurin; BCPs; Blue Copper Proteins; CPP; cell penetrating peptides; CSP; chemical shift perturbation; EPR; electronic paramagnetic reson
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Keywords: EMT; epithelial-mesenchymal transition; TF; transcription factor; ZF; zinc finger; TSS; transcription start site; MD; molecular dynamics; EMSA; electrophoretic mobility shift assay; ChIP; chromatin immunoprecipitation assay; PDB; Protein Data Bank; SS;
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Keywords: Angiogenesis; Flavones; Quercetin; Luteolin; Antiangiogenic therapy; VEGF; Vascular endothelial growth factor; PDB; Protein data bank; SDS-PAGE; Sodium dodecyl sulphate-Polyacrylamide gel electrophoresis; PVDF; Polyvinylidene fluoride; MMFF94; Merck molec
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Keywords: Dp; Dystrophin; DMD; Duchenne Muscular Dystrophy; DAPC; Dystrophin Associated Protein Complex; DG; Dystroglycan; MDDGC9; Muscular Dystrophy, Dystroglycanopathy, Type C9; OMIM; Online Mendelian Inheritance in Man; ABD; Actin Binding Domain; SpR; Spectrin R
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Keywords: AR; androgen receptor; DMEM; Dulbecco's minimal essential medium; FCS; fetal calf serum; GR; glucocorticoid receptor; GRE; glucocorticoid response element; GST; glutathione S-transferase; HEK; human embryonic kidney; IPTG; isopropyl-β-d-thiogalactoside
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Keywords: IPTG; isopropyl β-d-1-thiogalactopyranoside; CTC; 5-cyano-2,3-ditolyl tetrazolium chloride; TMAO; trimethylamine n-oxide; GFP; green fluorescent protein; wt; wild type; PDB; protein data bank; IP; propidium iodide; Protein aggregation; Protein folding; P
Elsevier - ScienceDirect - الزویر - ساینس دایرکت
Keywords: PTP; protein tyrosine phosphatase; RCC; redox cycling compounds; ROS; reactive oxygen species; HTS; high-throughput screen; PDB; protein data bank; pNPP; para-nitrophenyl phosphate; VS; virtual screening; DTT; dithiothreitol; pTyr; phosphotyrosine; Protei
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Keywords: ANT; adenine nucleotide translocase; CsA; cyclosporine-A; CypD; cyclophilin D; DTG; double transgenic; GST; glutathione S-transferase; MHC; α-myosin heavy chain; MPT; mitochondrial permeability transition; NTG; non-transgenic; PDB; protein data bank; PiC
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Keywords: ABC; ATP binding cassette; ADP; Adenosine-5′-diphosphate; AMP; Adenosine-5′-monophosphate; AMPPNP; Adenosine-5′-(β,γ-imido)triphosphate; ATP; Adenosine-5′-triphosphate; BACE1; β-Site amyloid precursor protein cleaving enzyme 1; BPM; Biophysical
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Keywords: MD; molecular dynamics; ECD; essential collective dynamics; PCA; principal component analysis; WT; wild type; ABA; A8S abscisic acid; PDB; Protein Data Bank; PP2C; phosphatase type 2C; PYR1; pyrabactin resistance 1; PYL; PYR1-like; RCAR; regulatory compon
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Keywords: AGEs; advanced glycation end-products; VEGF; vascular endothelial growth factor; T2DM; type 2 diabetes mellitus; MTT; [3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide; PDB; phorbol dibutyrate; PKC; protein kinase C; DG; diacylglycerol; Aqueou
Elsevier - ScienceDirect - الزویر - ساینس دایرکت
Keywords: BTP; 1,3-bis[tris(hydroxymethyl)methylamino]propane; DAH7P; 3-deoxy-d-arabino-heptulosonate 7-phosphate; DAH7PS; 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase; E4P; d-erythrose 4-phosphate; PDB; protein data bank; PEG; polyethylene glycol; SAXS; sm
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Keywords: MLP; major latex protein; PDB; Protein Data Bank; PR-10; pathogenesis-related proteins family 10; RMSD; root mean square deviation; RRP; ripening related protein; Act d 11; Kirola; Allergen; Food allergy; Kiwifruit; Bet v 1;
Elsevier - ScienceDirect - الزویر - ساینس دایرکت
Keywords: DAH7PS; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; IEC; ion exchange chromatography; MBP; maltose binding protein; PS; Phenyl Sepharose; Phe; phenylalanine; PAH; phenylalanine hydroxylase; PKU; phenylketonuria; PAGE; polyacrylamide gel electrop
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Keywords: PDB; protein data bank; CI2; chymotrypsin inhibitor 2; FKPB; FK506 binding protein; rmsd; root mean square deviation; NOE; nuclear Overhauser enhancement; PB; Poisson-Boltzmann; Hydrogen exchange; NMR; Continuum dielectric; Protein electrostatics; Struc
Elsevier - ScienceDirect - الزویر - ساینس دایرکت
Keywords: BLAST; alignment search tool; KP; known proteins; MD; molecular dynamics; RMSD; root mean square deviation; UP; unknown proteins; PDB; Protein Data Bank; Schistosoma mansoni; Vaccine; Bioinformatics; Molecular modeling;
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Keywords: PC; phosphatidylcholine; PE; phophatidylethanolamine; PS; phophatidylserine; PI; phosphatidylinositol; PG; phosphatidylglycerol; PA; phosphatidic acid; CL; cardiolipin; DPG; diphosphatidylglycerol; PIP2 or PI(4,5)P2; phosphatidylinositol 4,5-bisphosphate;
Elsevier - ScienceDirect - الزویر - ساینس دایرکت
Keywords: Angiogenesis; Antiangiogenic agents; Angiogenic cytokines/peptides; EC; endothelial cells; VEGF; vascular endothelial growth factor; VEGF Receptor; VEGFR; FGF; fibroblast growth factor; EGF; epidermal growth factor; epidermal growth factor receptor; EGFR;
Elsevier - ScienceDirect - الزویر - ساینس دایرکت
Keywords: 3D; three-dimensional; GB; generalized born; Diel; distance-dependent dielectric; GUI; graphical user interface; LMOD; low-mode; LLMOD; large-scale low-mode; LowModeMD; search method combining low-mode moves and molecular dynamics; Max-Iteration; maximum
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Keywords: BSA; Bovine serum albumin; Alp; Alprazolam; HSA; Human serum albumin; CD; Circular dichroism; BDZs; Benzodiazepines; GABA; γ-Aminobutyric acid; PDB; Protein Data Bank; EEMS; Excitation-emission matrix spectroscopy; LGA; Lamarckian genetic algorithm; GA
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Keywords: Hepcidin; hamp1; Antimicrobial peptides; Gene expression; M. anguillicaudatus; A. hydrophila; AMP; Antimicrobial peptide; qRT-PCR; Quantitative Polymerase Chain Reaction; aa; amino acid; pI; Theoretical isoelectric point; EC; Extinction coefficient; II; I
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Keywords: DFG-in; Asp-Phe-Gly-in; DFG-out; Asp-Phe-Gly-out; GAFF; general AMBER force field; HF; Hartree-Fock; MD; molecular dynamics; MM/GBSA; molecular mechanics/generalized Born surface area; PDB; protein data bank; PME; particle mesh Ewald; MBC; metastasic bowe
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Keywords: B[a]P; benzo[a]pyrene; PTM; posttranslational modification; NER; nucleotide excision repair; NCP; nucleosome core particle; PDB; protein data bank; MD; molecular dynamics; cis-B[a]P-dG; 10R (+)-cis-anti-B[a]P-N2-dG adduct; SHL; super-helical location; RMS
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Keywords: Mycobacterium tuberculosis; Thiazole synthase; Crystal structure; Covalently bound; Carbinolamine intermediate; Mtb; Mycobacterium tuberculosis; ThiG; Thiazole synthase; DXP; 1-deoxy-d-xylulose-5-phosphate; POA; pyrazinoic acid; CSS; complexation signific
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Keywords: TCR; T cel receptors; MHC; Major Histocompatibility Complex; IEDB; immune epitope database; HLA; human leukocyte antigen; CDR; complementarity determining region; RMSD; root mean square deviation; PDB; Protein Data Bank; MCM; Monte Carlo Method; AUC; area
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Keywords: ARMS; amplification-refractory mutation system; BER; base excision repair; CI; confidence interval; DDG; Gibbs free energy change; HWE; Hardy-Weinberg equilibrium; HMM; Hidden Markov Model; NCBI; National Centre for Biological Information; NHEJ; non-hom
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Keywords: Staphylococcus aureus; Efflux pump inhibitors; Docking; Aminoguanidine hydrazones; EPIs; efflux pump inhibitors; AGH's; aminoguanidine hydrazones; MICs; minimum inhibitory concentrations; MTT; 1-(4,5-dimethylthiazol-2-yl)-3,5-diphenyl formazan; MDR; multi
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Keywords: Endosymbiosis; Centella asiatica; Oxidative stress; Piriformospora indica; Total antioxidant capacity; PiCWE; P. indica Cell Wall Extract; HRP; Horse Radish Peroxidase; MTT; 3- (4, 5- dimethylthiazol-2-yl)-2, 5- diphenyltetrazolium bromide; PDA; Potato De
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Keywords: Local tissue damage; Metalloproteinase; Molecular docking; Snake venom; Triterpenic acids; BA; betulinic acid; CK-NAC; creatine kinase activated by N-acetyl cysteine; CM-Sephadex; carboxymethyl sephadex; IC50; half maximal inhibitory concentration; i.p.;
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Keywords: rBLCel; wild-type recombinant cellulase enzyme; MTCC; Microbial Type Culture Collection; LB; Luria-Bertani; kcat; turnover number; Km; Michaelis constant; PDB; Protein Data Bank; Vmax; maximum velocity; cel12A; endocellulase gene; CMC; Carboxymethylcellul
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Keywords: AR; androgen receptor; CYP11A1; cytochrome P450 family 11 subfamily a member 1; CYP17A1; cytochrome P450 family 17 subfamily a member 1; DHH; desert hedgehog; DMRT1/2/3; doublesex and mab-3 related transcription factor 1/2/3; DSD; disorders of sex develop
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Keywords: CDS; coding sequence; GB; GenBank; katG; gene coding for a bifunctional catalase-peroxidase; HGT; horizontal gene transfer; ML; maximum likelihood phylogenetic method; PDB; protein data bank; PolA; polyadenylation site; ROS; reactive oxygen species; RT-qP
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Keywords: SNP; single nucleotide polymorphism; SIFT; Sorting Intolerant From Tolerant; PolyPhen; phenotype polymorphism; nsSNP; nonsynonymous single nucleotide polymorphism; MUSTER; MUlti-Sources ThreadER; NCBI; National Centre for Biological Information; PROVEAN;