Keywords: Intrinsically disordered proteins; New functions; Energetic; Coherence; Origin of life; MPT; membrane-pump-theory; AIH; association-induction hypothesis; RRM; resonant recognition model; IDP; intrinsically disordered protein; IDPR; intrinsically disordere
مقالات ISI (ترجمه نشده)
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Keywords: CLK; CDC-like kinase; hnRNP; heterogeneous nuclear ribonucleoprotein; HIF; hypoxia induced factor; KLF6; Krüppel-like factor 6; MM; multiple myeloma; NEK2; NIMA-related kinase 2; PHLPP1; pleckstrin homology (PH) domain leucine-rich repeat protein phospha
Keywords: IDR; intrinsically disordered region; (r)RNA; (ribosomal) ribonucleic acid; LCS; low complexity sequence; LCD; low complexity domain; PEG; polyethylene glycol; RNP; ribonucleoprotein; RRM; RNA recognition motif; Aqueous two-phase system; Coacervate; Intri
Keywords: Infrastructure Sharing; Scheduling; RRM; Cloud RANs; 4G; 5G
Keywords: High-speed railway communications; HSR; Radio resource management; RRM; Optimization design
Keywords: ChIP; chromatin immunoprecipitation; CLIP-seq; UV crosslinking and immunoprecipitation followed by high-throughput sequencing; ESE; exonic splicing enhancer; EJC; exon junction complex; hnRNP; heterogenous nuclear ribonucleoprotein; ISE; intronic splicing
Keywords: eIF; eukaryotic translation initiation factor; IC; initiation complex; TC; ternary complex; EJC; Exon Junction Complex; PABP; poly-A binding protein; SF2; Superfamily 2; DDX; DEAD-box protein; DHX; DExH-box protein; RHA; RNA helicase A; UTR; untranslated
The function and clinical significance of eIF3 in cancer
Keywords: eIFs; eukaryotic translation initiation factors; eIF3; eukaryotic translation initiation factor 3; IRES; internal ribosome entry site; PABP; polyA binding protein; CKIs; cyclin-dependent kinase inhibitors; NER; nucleotide excision repair; GC; gastric carc
Role of GW182 protein in the cell
Keywords: Ago; argonaute; TNRC6; trinucleotide repeat-containing protein 6; AIN1 and AIN2; ALG-1 interacting protein; miRISC; miRNA induces silencing complex; UBA; ubiquitin-associated domain; Q-rich; glutamine rich region; Mid; middle domain; RRM; RNA recognition
La involvement in tRNA and other RNA processing events including differences among yeast and other eukaryotes
Keywords: cKO; conditional knockout; DFC; dense fibrillar component; LaM; La motif; LARP; La-related protein; m7G-cap; 7-methyl-guanosine-cap; RRM; RNA recognition motif; RNAP; RNA polymerase; snRNA; small nuclear RNA; tRFs; tRNA fragments; tRNAome; tRNA gene conte
Bioinformatics profiling and expressional studies of microRNAs in root, stem and leaf of the bioenergy plant switchgrass (Panicum virgatum L.) under drought stress
Keywords: Biofuel crop; Abiotic stress; Regulatory RNAs; qRT-PCR; Aly; Arabidopsis lyrata; AP; APETELA; ARF; Auxin Response Factor; Ath; Arabidopsis thaliana; ATP; Adenosine Tri Phosphate; BLAST; Basic Local Alignment Search Tool; BLASTx; Translated Nucleotide Prot
The physiological and pathological biophysics of phase separation and gelation of RNA binding proteins in amyotrophic lateral sclerosis and fronto-temporal lobar degeneration
Keywords: ADMA FUS; asymmetrically di-methylated arginine FUS; CHOP; C/EBP homologous protein gene; DDX4; DEAD box helicase 4; EWS; Ewing sarcoma protein; fALS; familial amyotrophic lateral sclerosis; FTLD; frontotemporal lobar degeneration; FUS; fused in sarcoma p
Isolation of the sex-determining gene Sex-lethal (Sxl) in Penaeus (Litopenaeus) vannamei (Boone, 1931) and characterization of its embryogenic, gametogenic, and tissue-specific expression
Keywords: Sxl; Sex-lethal; SS; Splice site; tra; transformer; tra-2; transformer-2; dsx; doublesex; dmrt; doublesex and mab-3 related transcription factor; QTL; quantitative trait locus; PFA; paraformaldehyde; PBS; phosphate buffered saline; RNA; ribonucleic acid;
Systemic manifestations of primary Sjögren's syndrome in the NOD.B10Sn-H2b/J mouse model
Keywords: Sjögren's syndrome; Autoantibodies; Extra-glandular disease; NOD.B10; ANA; Anti-nuclear autoantibodies; BALT; Bronchus-associated lymphoid tissue; CA6; Carbonic anhydrase 6; dsDNA; Double-stranded DNA; EGM; Extra-glandular manifestations; FB; Follicular
Oleic Acid Induces MiR-7 Processing through Remodeling of Pri-MiR-7/Protein Complex
Keywords: miR; microRNA; RNA-BP; RNA-binding protein; pri-miR; primary miR; pre-miR; precursor miR; GBM; glioblastoma multiforme; HuR; Hu antigen R; MSI2; Musashi homolog2; CTL; conserved terminal loop; OA; oleic acid; RRM; RNA recognition motif; EMSA; electrophore
Redirecting SR Protein Nuclear Trafficking through an Allosteric Platform
Keywords: RS; arginine-serine; snRNP; small nuclear ribonucleoprotein; SR; serine-arginine; SR protein; splicing factor containing SR dipeptide repeats; SRSF1; SR protein splicing factor; RRM; RNA recognition motif; RS domain; domain rich in arginine-serine d
Comprehensive Identification of Nuclear and Cytoplasmic TNRC6A-Associating Proteins
Keywords: TNRC6A; trinucleotide repeat-containing gene 6A protein; Q-rich; glutamine-rich; RRM; RNA recognition motif; AGO; Argonaute; miRNA; microRNA; CCR4; carbon catabolite repression 4; CAF1; CCR4-associated factor 1; NLS; nuclear localization signal; NES; nucl
Whole-transcriptome microarray analysis reveals regulation of Rab4 by RBM5 in neurons
Keywords: AMPAR; α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor; GRASP-1; GRIP-associated protein-1; KO; knockdown; lncRNA; long non-coding RNAs; NMDAR; N-methyl-D-aspartate receptor; NUMB; endocytic adaptor protein; Rab4; Ras-related protein Rab-4;
Targeting proteins to RNA transcription and processing sites within the nucleus
Keywords: pre-mRNA; precursor messenger RNA; CB; cajal body; HLB; histone locus body; PML; promyelocytic leukemia protein; PML-NBs; nuclear bodies; snRNP; small nuclear ribonucleoprotein; RS domain; arginine/serine domain; RRM; RNA recognition motif; SR; serine/arg
Idarubicin-intensified BUCY2 conditioning regimen improved survival in high-risk acute myeloid, but not lymphocytic leukemia patients undergoing allogeneic hematopoietic stem cell transplantation: A retrospective comparative study
Keywords: allo-HSCT; allogeneic hematopoietic stem cell transplantation; IDA; idarubicin; AML; acute myeloid leukemia; ALL; acute lymphocytic leukemia; OS; overall survival; DFS; disease-free survival; RR; relapse rate; BU; busulfan; CY; cyclophosphamide; VP-16; et
Characterization of SRF from MBT plants: Influence of the input waste and of the processing technologies
Keywords: CM; combustible material; DTG; differential thermogravimetric analysis; MBT-1; plant 1 of mechanical biological treatment; MBT-2; plant 2 of mechanical biological treatment; BWC-3; plant 3 of biowaste composting; NMC; no combustible material; RAB1; reject
Steroid receptor RNA activator: Biologic function and role in disease
Keywords: AF-2; activation function-2; AR; androgen receptor; C/EBPα; ccaat-enhancer-binding protein α; CTCF; CCCTC-binding factor; Ddx5; DEAD box protein 5; ERα; estrogen receptor α; GR; glucocorticoid receptor; Hes1; hairy and enhancer of split-1; HP1γ; hete
TD-LTE virtual cells: An SDN architecture for user-centric multi-eNB elastic resource management
Keywords: TD-LTE; SDN; RRM
TDP-43/FUS in motor neuron disease: Complexity and challenges
Keywords: AD; Alzheimer's disease; Ago2; Argonaute 2; ALS; Amyotrophic lateral sclerosis; ALS/PD; amyotrophic lateral sclerosis and Parkinsonism-dementia complex; AMPA; α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid; ATF3; activating transcription factor 3
RNA editing in plants: Machinery and flexibility of site recognition
Keywords: MORF; multiple organellar RNA editing factor; NDH; NADH dehydrogenase-like (complex); PPR; pentatrico peptide repeat; RIP; RNA editing factor interacting protein; RRM; RNA recognition motif; Chloroplast; DYW domain; NDH; PPR protein; RNA editing; Translat
Role of Auf1 in elimination of oxidatively damaged messenger RNA in human cells
Keywords: ROS; reactive oxygen species; 8-oxo-Gua; 8-oxo-7,8-dihydroguanine; FBS; fetal bovine serum; DMEM; Dulbecco's modified Eagle's medium; RRM; RNA recognition motif; TALEN; transcription activator-like effecter nuclease; Oxidized RNA; Auf1 protein; 8-Oxo-
TDP-35 sequesters TDP-43 into cytoplasmic inclusions through binding with RNA
Keywords: ALS; amyotrophic lateral sclerosis; DNase; deoxyribonuclease; FISH; fluorescent in situ hybridization; FTLD; frontotemporal lobar degeneration; GFP; green fluorescent protein; IF; immunofluorescence; ITC; isothermal titration calorimetry; RIP; RNA immunop
Identification of a telomeric DNA-binding protein in Eimeria tenella
Keywords: Telomeric DNA-binding protein; EtGbp1p; RRM; Eimeria tenella;
A truncated hnRNP A1 isoform, lacking the RGG-box RNA binding domain, can efficiently regulate HIV-1 splicing and replication
Keywords: hnRNP A1; RRM; RGG-box; Alternative splicing; HIV-1;
A prototype cognitive radio architecture for TVWS exploitation under the real time secondary spectrum market policy
Keywords: TVWS; CR; Spectrum broker; RRM; Spectrum trading
SRp20: An overview of its role in human diseases
Keywords: AS; alternative splicing; PTM; post-translational modifications; RBDs; RNA-binding domains; RRM; RNA recognition motif; RS domain; domain rich in arginine and serine; snRNA; small nuclear RNA; snRNP; small nuclear RiboNucleoProtein; SR-proteins; serine/ar
Functional characterization of a plastid-specific ribosomal protein PSRP2 in Arabidopsis thaliana under abiotic stress conditions
Keywords: Arabidopsis thaliana; Abiotic stress; Plastic-specific ribosomal protein; Ribosome function; RNA-binding protein; PSRP; plastid-specific ribosomal protein; RBP; RNA-binding protein; RRM; RNA-recognition motif;
Molecular mechanism of oxidation-induced TDP-43 RRM1 aggregation and loss of function
Keywords: TDP-43; trans-activation region DNA-binding protein of 43-kDa; RRM; RNA recognition motif; ALS; amyotrophic lateral sclerosis; FTLD; frontotemporal lobar degeneration; AD; Alzheimer's disease; PD; Parkinson's disease; HD; Huntington's disease; NTD;
ELAV proteins along evolution: Back to the nucleus?
Keywords: RBP; RNA-binding protein; elav; embryonic lethal abnormal vision; miRNA; microRNA; rbp9; RNA-binding protein 9; fne; found in neurons; ARE; AU-rich element; UTR; untranslated region; RRM; RNA recognition motif; PABP; polyA-binding protein; eiF4A; eukaryot
Distinct roles of the R3H and RRM domains in poly(A)-specific ribonuclease structural integrity and catalysis
Keywords: ANS; 1-anilinonaphtalene-8-sulfonate; CD; circular dichroism; CTD; C-terminal domain; DTT; dithiothreitol; IPTG; isopropyl-1-thio-β-d-galactopyranoside; PARN; poly(A)-specific ribonuclease; p74; the full length PARN; p62; the N-terminal fragment of PARN
Reduced angiotensin II levels cause generalized vascular dysfunction via oxidant stress in hamster cheek pouch arterioles
Keywords: ACE; angiotensin converting enzyme; ACh; acetylcholine; ANG II; angiotensin II; ARB; angiotensin receptor blocker; AT1; angiotensin II type 1 receptor; cGMP; cyclic guanosine monophosphate; Cu/Zn SOD; copper zinc (intracellular) superoxide dismutase; DHE;
RNA binding proteins in the regulation of heart development
Keywords: 3â² UTR; 3â² untranslated region; AVC; atrioventricular canal; CELF; CUG-BP, Elav-like family; CHAMP; cardiac helicase activated by MEF2 protein; Csm; cardiac-specific isoform of Mov10l1; DGCR8; DiGeorge Syndrome critical region gene 8; DM; dystrophia m
Yeast hnRNP-related proteins contribute to the maintenance of telomeres
Keywords: hnRNP; heterogeneous nuclear ribonucleoprotein; RRM; RNA recognition motif; PD; population doubling; TFL; telomere fragment length; Npl3; Cbc2; hnRNP A1; Senescence; Telomere capping;
Computational methods for prediction of protein-RNA interactions
Keywords: AUC; area under receiver operating characteristic curve; cryo-EM; cryo-electron microscopy; DARS-RNP; decoys as reference state based potential to assess structure of protein-RNA complexes; FPR; false positive rate (1 - specificity); HMM; Hidden Marko
Nuclear hormone receptor co-repressors: Structure and function
Keywords: HDAC; histone deacetylase; HID; histone interaction domain; LBD; ligand binding domain; ID; interaction domain; RRM; RNA recognition motif; Nuclear receptor; Co-repressor; SMRT/NCoR; TBL1; GPS2; HDAC;
Levels of Gemcitabine Transport and Metabolism Proteins Predict Survival Times of Patients Treated With Gemcitabine for Pancreatic Adenocarcinoma
Keywords: Nucleoside Transporters; Drug Metabolism; Pancreatic Cancer; Biomarker; CI; confidence interval; dCK; deoxycytidine kinase; hENT1; human equilibrative nucleoside transporter 1; HR; hazard ratio; OS; overall survival; PDAC; pancreatic ductal adenocarcinoma
The RNA-Binding Protein RBPMS2 Regulates Development of Gastrointestinal Smooth Muscle
Keywords: Developmental Biology; RNA-Binding Protein; Gastrointestinal Tract; Smooth Muscle Contraction; αSMA; α-smooth muscle actin; BMP; bone morphogenetic protein; CIPO; chronic intestinal pseudo-obstruction; DMEM; Dulbecco's modified Eagle medium; E; embryoni
Human U2Bâ³ protein binding to snRNA stemloops
Keywords: RRM; RNA binding protein; U2Bâ³; Protein:RNA thermodynamics;
A genome-wide shRNA screen for new OxPhos related genes
Keywords: ETC; electron transport chain; OxPhos; oxidative phosphorylation; mtDNA; mitochondrial DNA; RNAi; RNA interference; siRNA; silencing RNA; shRNA; short hairpin RNA; UPS; ubiquitin proteasome system; NER; nucleotide excision repair; RRM; RNA recognition mot
Multistep Kinetics of the U1A–SL2 RNA Complex Dissociation
Keywords: RRM, RNA recognition motif; SL2, stem loop 2; SPR, surface plasmon resonance; MD, molecular dynamicsdynamics; RRM; RNA–protein; temperature jump; stopped flow
A fraction of the transcription factor TAF15 participates in interactions with a subset of the spliceosomal U1 snRNP complex
Keywords: snRNA; small nuclear RNA; snRNP; small nuclear ribonucleoprotein; hnRNP; heterogeneous nuclear ribonucleoprotein; TBP; TATA-binding protein; TAF; TBP-associated factor; CTD; carboxy-terminal domain; RNA pol II; RNA polymerase II; SR; serine/arginine-rich;
Enhanced radio resource management algorithms for efficient MBMS service provision in UTRAN
Keywords: 3GPP; 3rd Generation Partnership Project; AH; Activation Hysteresis; AR; Alteration Rate; CCIT; Cell Context Information Table; CN; Core Network; CPICH; Common Pilot Channel; DCH; Dedicated Channel; FACH; Forward Access Channel; FACH_IT; FACH Information
Comparative analysis of Arabidopsis zinc finger-containing glycine-rich RNA-binding proteins during cold adaptation
Keywords: Arabidopsis thaliana; Cold adaptation; Glycine-rich RNA-binding protein; RNA chaperone; Zinc finger; CSDP; cold shock domain protein; GRP; glycine-rich RNA-binding protein; RRM; RNA-recognition motif; RZ-1; RNA-binding protein containing RRM and CCHC-type
An RNAi screen of the RRM-domain proteins of Trypanosoma brucei
Keywords: RNA binding protein; Trypanosoma; RRM
Control of Dead end localization and activity – Implications for the function of the protein in antagonizing miRNA function
Keywords: Dead end; Primordial germ-cell; Zebrafish; miRNA; RRM