کد مقاله | کد نشریه | سال انتشار | مقاله انگلیسی | نسخه تمام متن |
---|---|---|---|---|
1951986 | 1538415 | 2015 | 11 صفحه PDF | دانلود رایگان |
عنوان انگلیسی مقاله ISI
The Trametes hirsuta 072 laccase multigene family: Genes identification and transcriptional analysis under copper ions induction
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کلمات کلیدی
SSH2,6-DMPRACE-PCRMOSqPCRPCBsABTS2,2′-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) - 2،2'-azino-bis (3-ethylbenzothiazoline-6-sulphonic acid)2,6-dimethoxyphenol - 2،6-dimethoxyphenolPTr - PTRquantitative RT-PCR - RT-PCR کمیGoI - بروdifferential expression - بیان دیفرانسیلPolychlorinated biphenyls - بیفنیل پلیکلر phylogenetic analysis - تجزیه و تحلیل فیلوژنتیکrapid amplification of cDNA ends - تقویت سریع cDNA به پایان می رسدWhite-rot fungi - قارچ سفید پوسیدگیSuppression subtractive hybridization - هیبریداسیون تفکیک پذیری سرکوبPolycyclic aromatic hydrocarbons - هیدروکربن آروماتیک چندحلقهایPAHs - هیدروکربن های آروماتیک چند حلقه ایgene of interest - ژن مورد علاقه
موضوعات مرتبط
علوم زیستی و بیوفناوری
بیوشیمی، ژنتیک و زیست شناسی مولکولی
زیست شیمی
پیش نمایش صفحه اول مقاله
چکیده انگلیسی
Laccases, blue copper-containing oxidases, â¿an play an important role in a variety of natural processes. The majority of fungal laccases are encoded by multigene families that express closely related proteins with distinct functions. Currently, only the properties of major gene products of the fungal laccase families have been described. Our study is focused on identification and characterization of laccase genes, which are transcribed in basidiomycete Trametes hirsuta 072, an efficient lignin degrader, in a liquid medium, both without and with induction of laccase transcription by copper ions. We carried out production of cDNA libraries from total fungal RNA, followed by suppression subtractive hybridization and mirror orientation selection procedures, and then used Next Generation Sequencing to identify low abundance and differentially expressed laccase transcripts. This approach resulted in description of five laccase genes of the fungal family, which, according to the phylogenetic analysis, belong to distinct clusters within the Trametes genus. Further analysis established similarity of physical, chemical, and catalytic properties between laccases inside each cluster. Structural modeling suggested importance of the sequence differences in the clusters for laccase substrate specificity and catalytic efficiency. The implications of the laccase variations for the fungal physiology are discussed.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Biochimie - Volume 116, September 2015, Pages 154-164
Journal: Biochimie - Volume 116, September 2015, Pages 154-164
نویسندگان
Daria V. Vasina, Orkhan N. Mustafaev, Konstantin V. Moiseenko, Natalia S. Sadovskaya, Olga A. Glazunova, Ðlexander Ð. Tyurin, Tatiana V. Fedorova, Andrey R. Pavlov, Tatiana V. Tyazhelova, Irina V. Goldenkova-Pavlova, Olga V. Koroleva,