Keywords: رونویسی شروع سایت; TSS; Transcription Start Site; SRE; Symmetric Relative Entropy; NSRE; New Symmetric Relative Entropy; Ac-NSRE; Accumulated New Symmetric Relative Entropy; Nucleosome sequence; Concerted evolution; Transcription regulation; Sequence preference; Constitutiv
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Keywords: رونویسی شروع سایت; AR; Amphiregulin; ChIP; Chromatin immunoprecipitation; CM; Conditional medium; EMT; Epithelial-mesenchymal transition; Endostatin; Collagen XVIII; HCC; Hepatocellular carcinoma; HUVEC; Human umbilical vein endothelial cell; IGFBP-3; Insulin-like growth fa
Keywords: رونویسی شروع سایت; rRNA; ribosomal RNA; RNA Pol I; RNA Polymerase I; TSS; transcription start site; NOMe; nucleosome occupancy and methylome assay; OPP; O-propargyl-puromycin; Osteoblast; rRNA; Ribosome biogenesis; RNA Pol I; UBF1; Osteoprogenitor; Bone;
Keywords: رونویسی شروع سایت; Dyn A; dynorphin A; Dyn B; dynorphin B; CTF; C-terminal fragment; FANS; fluorescence-activated nuclei sorting; LER; leucine-enkephalin-arginine; NLS; nuclear localization signal; PDYN; prodynorphin; PENK; proenkephalin; RIA; radioimmunoassay; SP; signal p
Keywords: رونویسی شروع سایت; BLM; bleomycin; IC50; half maximal inhibitory concentration; MNase; micrococcal nuclease; MTT; 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide; TSS; transcription start site; ZBM; zorbamycin; Anti-tumour agent; Bleomycin analogue; Chromatin s
Keywords: رونویسی شروع سایت; Benchmark dose modeling; DNA methylation; LINE-1; miRNA; Metabolomics; Hepatotoxicants; Dose-response; Ahr; Aryl Hydrocarbon receptor; BA; Bile Acid; BMD; Benchmark Dose; BrdU; Bromodeoxyuridine; CAR; Constitutive Androgen Receptor; CF; Clofibrate; ChIP;
Keywords: رونویسی شروع سایت; MLFq; myelodysplasia/myeloid leukemia factor; NPM; nucleophosmin; TSS; transcription start site; Pol II; RNA polymerase II; Hsc70; heat shock cognate protein; Hsp70; heat shock protein 70; NEF; nucleotide exchange factor; BAG2; BCL2-associated anthanogene
Keywords: رونویسی شروع سایت; DEGs; differentially expressed genes; RE; receptive endometrium; PE; pre-receptive endometrium; RNA-Seq; RNA-sequencing; SNPs; single nucleotide polymorphisms; INDEL; insertion-deletion; AS; alternative splicing; DEU; differential exon usage; D5; gestatio
Keywords: رونویسی شروع سایت; MZF; myeloid zinc finger; NHP; non-human primate; STR; short tandem repeat; TF; transcription factor; TSS; transcription start site; UTR; untranslated region; Short tandem repeat; Core promoter; Human-specific; Primate-specific; AP-2alpha; Sp1; MZF; Genom
Keywords: رونویسی شروع سایت; Adipose stem cell; Chromatin; Gene expression; Glucose; Histone modification; Inflammation; ASC; adipose tissue-derived MSC; ChIP; chromatin immunoprecipitation; GO; gene ontology; IR; inflammation response; MSC; mesenchymal stromal cell; TSS; transcripti
Keywords: رونویسی شروع سایت; HR; histone residue; NUC; nucleosome; PTM; post-translational modification; CM; chromatin modifier; TF; transcription factor; NFR; nucleosome-free region; TSS; transcription start site; KS; Kolmogorov-Smirnov; HAT; histone acetyltransferase; HDAC; histo
Keywords: رونویسی شروع سایت; Therapy-resistant asthma; childhood asthma; peripheral blood leukocytes; transcriptome; long noncoding RNA; CA; Controlled persistent asthma; CAGE; Cap Analysis of Gene Expression; CTRL; Healthy control subject; GLM; Generalized linear model; GO; Gene Ont
Keywords: رونویسی شروع سایت; H. pylori; Helicobacter pylori; CGI; CpG islands; 5-Aza-dC; 5-aza-2â²-deoxycytidine; TSS; transcription start site; Epigenetics; Chromatin remodeling; DNA methylation; Field defect;
Keywords: رونویسی شروع سایت; Epigenetic modifiers; Chromatin; Therapy; Cancer; Histone profiles; ac; acetyl; ATRA; all-trans retinoic acid; BrD; bromodomain; FL; follicular lymphoma; H; histone; HAT; histone acetyltransferase; HDAC; histone deacetylase; HMT; histone methyltransferase
Keywords: رونویسی شروع سایت; EMT; epithelial-mesenchymal transition; TF; transcription factor; ZF; zinc finger; TSS; transcription start site; MD; molecular dynamics; EMSA; electrophoretic mobility shift assay; ChIP; chromatin immunoprecipitation assay; PDB; Protein Data Bank; SS;
Keywords: رونویسی شروع سایت; FPKM; fragments per kilobase per million library reads; TE; transposable element; LINE; long interspersed nuclear element; MaSp; major ampullate silk protein; TSS; transcription start site; TF; transcription factor; MBE; musashi binding element; LTR; long
Keywords: رونویسی شروع سایت; dpc; days post coitum; DSB; double stranded break; LBD; ligand binding domain; PGC; primordial germ cell; RA; retinoic acid; RARE; retinoic acid response element; TGCT; testicular germ cell tumour(s); TSS; transcription start site; VAD; Vitamin A deficien
Keywords: رونویسی شروع سایت; chromatin; histone variants; transcription start site; transcriptional regulation; unstable nucleosomes; nucleosome mapping
Keywords: رونویسی شروع سایت; TSM; tissue specific methylation; EBV; Epstein Bar virus; SHP1; SH2 domain containing phosphatase; GEO; Gene Expression Omnibus; CU-DREAM; Connection Up- and Down-Regulation Expression Analysis of Microarrays; TSS; transcription start site; CGI; CpG islan
Keywords: رونویسی شروع سایت; AP-1; jun proto-oncogene; BAI3; brain-specific angiogenesis inhibitor 3; CADM2; cell adhesion molecule 2; CAGE; cap analysis of gene expression; cDNA; DNA complementary to RNA; ChIP; chromatin immunoprecipitation; FGF14; fibroblast growth factor 14; GADD4
Keywords: رونویسی شروع سایت; 3C; chromosome conformation capture; Abd-B; Abdominal-B; AGO2; Argonaute 2; ANT-C; Antennapedia complex; BEAF-32; boundary element-associated factor of 32Â kDa; BTB; broad-complex, tramtrack, bric-a-brac; BX-C; bithorax complex; ChIP; chromatin immunoprec
Keywords: رونویسی شروع سایت; AP-1; Activator protein-1; APE; Apurinic/apyrimidinic endonuclease; ARE; Antioxidant response element; ChIP; Chromatin immunoprecipitation; CRE; cAMP response element; CREB; CRE binding protein; Egr-1; Early growth response factor-1; EMSA; Electrophoretic
The AtMYB44 promoter is accessible to signals that induce different chromatin modifications for gene transcription
Keywords: رونویسی شروع سایت; Arabidopsis; DNA methylation; Histone modification; Nucleosome; Osmotic stress; Transcription; ABA; abscisic acid; GUS; β-glucuronidase; JA; jasmonic acid; MS; Murashige and Skoog; qRT-PCR; quantitative reverse-transcription PCR; RNAPII; RNA polymerase I
Cloning and characterization of â6/â5 fatty acyl desaturase (Fad) gene promoter in the marine teleost Siganus canaliculatus
Keywords: رونویسی شروع سایت; ALA; α-linolenic acid (18:3n-3); AP1; activated protein 1; ARA; arachidonic acid (20:4n-6); C/EBP; CCAAT enhancer binding protein; DHA; docosahexaenoic acid (22:6n-3); DR1; direct repeat 1 element; EFA; essential fatty acid; EPA; eicosapentaenoic acid (2
Heterozygous Deletion Impacting SMARCAD1 in the Original Kindred with Absent Dermatoglyphs and Associated Features (Baird, 1964)
Keywords: رونویسی شروع سایت; genodermatoses; fingerprints; whole exome sequencing; ADG; Adermatoglyphia; BBS; Basan-Baird syndrome; lncRNA; Long noncoding RNA; PCR; Polymerase chain reaction; TSS; Transcription start site;
Chd1p recognizes H3K36Ac to maintain nucleosome positioning near the transcription start site
Keywords: رونویسی شروع سایت; Chromatin remodeling; Nucleosome sliding; H3K36Ac; Chd1p; Saccharomyces cerevisiae; CHD; Chromo-helicase/ATPase DNA-binding; Chd1p; Chromo-helicase/ATPase DNA-binding protein 1; CHROMO; chromodomain; EMSA; Electromobility shift assays; H3K4me3; tri-methyl
Peculiar genes for thermostable bifunctional catalase-peroxidases in Chaetomium thermophilum and their molecular evolution
Keywords: رونویسی شروع سایت; CDS; coding sequence; GB; GenBank; katG; gene coding for a bifunctional catalase-peroxidase; HGT; horizontal gene transfer; ML; maximum likelihood phylogenetic method; PDB; protein data bank; PolA; polyadenylation site; ROS; reactive oxygen species; RT-qP
Selective inhibition of CTCF binding by iAs directs TET-mediated reprogramming of 5-hydroxymethylation patterns in iAs-transformed cells
Keywords: رونویسی شروع سایت; 5mC; 5-methylCytosine; 5hmC; 5-hydroxymethylCytosine; EMT; epithelial-to-mesenchymal transition; iAs; inorganic arsenic; iAs-T; inorganic arsenic transformed cells; NT; non-treated cell; qRT-PCR; quantitative reverse transcription-PCR; ChIP-qRT-PCR; chrom
PON1 DNA methylation and neurobehavior in Mexican-American children with prenatal organophosphate exposure
Keywords: رونویسی شروع سایت; ASMN; All Sample Mean Normalization; AREase; arylesterase; BMIQ; beta mixture quantile; CDC; Centers for Disease Control and Prevention; CHAMACOS; Center for the Health Assessment of Mothers and Children of Salinas; CV; coefficient of variation; DAP; dial
The evolutionary conservation of the bidirectional activity of the NWC gene promoter in jawed vertebrates and the domestication of the RAG transposon
Keywords: رونویسی شروع سایت; RAG transposon; NWC gene; Evolution of the adaptive immune system; Bidirectional promoter; TSS; transcription start site; RSS; recognition signal sequences; hsNWC; Homo sapiens NWC gene homologue; xtNWC; Xenopus tropicalis NWC gene homologue; drNWC; Danio
The genome-wide sequence specificity of DNA cleavage by bleomycin analogues in human cells
Keywords: رونویسی شروع سایت; BLM; bleomycin; IC50; half maximal inhibitory concentration; TSS; transcription start site; ZBM; zorbamycin; D; G A or T nucleotides; M; A or C nucleotides; R; G or A nucleotides; Y; C or T nucleotides; Anti-tumour agent; Bleomycin analogue; DNA sequence
CREB element is essential for unfolded protein response (UPR) mediating the Cu-induced changes of hepatic lipogenic metabolism in Chinese yellow catfish (Pelteobagrus fulvidraco)
Keywords: رونویسی شروع سایت; ACC; Acetyl-CoA carboxylase; CREB; cAMP-response element binding protein; ATF6; Activating transcription factor 6; ER; endoplasmic reticulum; ERSE; ER stress response element; FAS; Fatty acid synthase; GRP78/BiP; 78-kDa glucose-regulated protein; IRE1; In
Advances of DNase-seq for mapping active gene regulatory elements across the genome in animals
Keywords: رونویسی شروع سایت; DHSs; DNase I hypersensitive sites; CREs; cis-regulatory elements; TF; transcription factor; TSS; transcription start site; SNPs; single nucleotide polymorphisms; BMP4; bone morphogenetic protein 4; ENCODE; The Encyclopedia of DNA Elements; ATAC-seq; assa
A combined literature and in silico analysis enlightens the role of the NDRG family in the gut
Keywords: رونویسی شروع سایت; Biomarkers; Colorectal cancer; Intestinal tract; N-myc downstream-regulated gene; Tumor suppressors; BDM1; Brain developmental-related molecule 1; Cav-1; Caveolin-1; CRC; Colorectal cancer; DAC; 5-aza-2'-deoxycytine; DFS; Disease free survival; EMT; Epi
Role of tissue-specific promoter DNA methylation in regulating the human EKLF gene
Keywords: رونویسی شروع سایت; EKLF; erythroid Krüppel-like factor; TSS; transcription start site; GPA+/GPAâ; glycophorin-A positive/negative; BM; bone marrow; SAM; S-adenosylmethionine; EMSA; electrophoretic mobility shift assay; EKLF; DNA methylation; Erythroid-specific expression
The molecular characterization, expression pattern and alternative initiation of Megalobrama amblycephala Hif prolyl hydroxylase Phd1
Keywords: رونویسی شروع سایت; HIF; Hypoxia-inducible factors; PHD; HIF-α hydroxylases; DO; dissolved oxygen; hpf; post-fertilization; TSS; transcription start site; ORF; open reading frame; qRT-PCR; Quantitative real-time PCR; MAF; M. amblycephala fin cell line; UTR; untranslated reg
In vivo response of the human epigenome to vitamin D: A Proof-of-principle study
Keywords: رونویسی شروع سایت; 1,25(OH)2D3; 1α,25-dihydroxyvitamin D3; 25(OH)D3; 25-hydroxyvitamin D3; APOO; apolipoprotein O; CLIP4; CAP-Gly domain containing linker protein family member 4; EHMT2; euchromatic histone lysine methyltransferase 2; FAIRE-seq; formaldehyde-assisted isola
Transcriptional activation of a chimeric retrogene PIPSL in a hominoid ancestor
Keywords: رونویسی شروع سایت; FBS; fetal bovine serum; PIP5K1A; phosphatidylinositol-4-phosphate 5-kinase, type I, alpha; PLCE1; phospholipase C epsilon 1; PP; processed pseudogene; PSMD4; proteasome 26S subunit, non-ATPase 4; PtdIns(4,5)P2; phosphatidylinositol-4,5-bisphosphate; RACE
SOX9 Transcriptionally Regulates mTOR-Induced Proliferation of Basal Cell Carcinomas
Keywords: رونویسی شروع سایت; 4E-BP; 4E binding protein; AKT; v-akt murine thymoma viral oncogene homolog; BCC; basal cell carcinoma; BCNS; basal cell nevus syndrome; CCND1; cyclin D1; GLI; glioma-associated oncogene homolog; HEK; human embryonic kidney; ITRA; itraconazole; mTOR; mamm
Differential Wnt-mediated programming and arrhythmogenesis in right versus left ventricles
Keywords: رونویسی شروع سایت; Connexin43; Transcriptional regulation; Cardiac development; Cardiac electrophysiology; Wnt signaling, Ventricular tachycardia; SHF; Second heart field; RV; Right ventricle; LV; Left ventricle; ACM; Arrhythmogenic cardiomyopathy; GOF; Gain-of-function; LO
A Functional Role for the Epigenetic Regulator ING1 in Activity-induced Gene Expression in Primary Cortical Neurons
Keywords: رونویسی شروع سایت; AAVs; adeno-associated viral vectors; CDS; coding sequence; ChIP; chromatin immunoprecipitation; ING1; inhibitor of growth family member 1; piRNAs; Piwi-interacting RNAs; shRNA; short-hairpin RNA; TSS; transcription start site; epigenetics; gene regulatio
Genome-wide profiling of gene expression and DNA methylation provides insight into low-altitude acclimation in Tibetan pigs
Keywords: رونویسی شروع سایت; LincRNA; long intergenic noncoding RNAs; BS-seq; bisulfite sequencing; RIN; RNA integrity number; GEO; Gene Expression Omnibus; CPC; Coding Potential Calculator; Bin; binomial; ML; methylation level; P; proximal; I; intermediate; D; distal; GO; Gene Ontol
GATA4 is a transcriptional regulator of R-spondin1 in Japanese flounder (Paralichthys olivaceus)
Keywords: رونویسی شروع سایت; Po; Paralichthys olivaceus; FBCs; flounder brain cell line; cDNA; complementary deoxyribonucleic acid; ORF; open reading frame; UTR; Untranslated Regions; qRT-PCR; quantitative real-time polymerase chain reaction; ISH; in situ hybridization; CBA; cleaved
High-fat diet unveils an enhancer element at the Ped/Pea-15 gene responsible for epigenetic memory in skeletal muscle
Keywords: رونویسی شروع سایت; Ped/Pea-15; phosphoprotein enriched in diabetes/astrocytes; H3K4me1; histone H3 Lys4 monomethylation; H3K27Ac; histone H3 Lys27 acetylation; HG; high glucose; T2D; type 2 diabetes; STD; standard diet; HFD; high fat diet; GTT; glucose tolerance test; ITT;
Whole genome DNA methylation profiling of oral cancer in ethnic population of Meghalaya, North East India reveals novel genes
Keywords: رونویسی شروع سایت; OSCC; oral cancer or oral squamous cell carcinoma; HNSCC; head and neck squamous cell carcinoma; TSS; transcription start site; CGI; pG islands; IMA; Illumina methylation analyzer; SNPs; single nucleotide polymorphisms; FDR; false discovery rate; DAVID; d
Sativex® effects on promoter methylation and on CNR1/CNR2 expression in peripheral blood mononuclear cells of progressive multiple sclerosis patients
Keywords: رونویسی شروع سایت; CNR1; cannabinoid type 1; CNR2; cannabinoid type 2; MS; multiple sclerosis; MSS-SP; MS secondary progressive patients with spasticity; PBMCs; peripheral blood mononuclear cells; IFN-β-1b; interferon-β-1b; MS-HRM; methylation sensitive high resolution me
Activity analysis of LTR12C as an effective regulatory element of the RAE1 gene
Keywords: رونویسی شروع سایت; bp; base pairs; LTR; long terminal repeat; NF-Y; nuclear transcription factor Y; PCR; polymerase chain reaction; RAE1; ribonucleic acid export 1; siRNA; small interfering RNA; TFBS; transcription factor-binding site; TRR; tandem repeat region; TSS; transc
Sp3 controls fibroblast growth factor receptor 4 gene activity during myogenic differentiation
Keywords: رونویسی شروع سایت; Myogenesis; Proliferation; Differentiation; FGFR4; Fibroblast growth factor receptor 4; bp; Base pairs; TSS; Transcription start site; GM; Growth media; DM; Differentiation media; ChIP; Chromatin immunoprecipitation; AP2; Activator Protein 2; GCF; GC-fact
Fluorescence resonance energy transfer usage to track the sequence promoter changes in CGB5 gene in ovarian cancer patients
Keywords: رونویسی شروع سایت; FRET; fluorescence resonance energy transfer; CG; human chorionic gonadotropin; CGB; chorionic gonadotropin beta subunit; CGB5/8; chorionic gonadotropin beta subunit 5/8; SNP; single nucleotide polymorphism; TSS; transcription start site; DNA sequence cha
IL-9 and Th9 cells in health and diseases-From tolerance to immunopathology
Keywords: رونویسی شروع سایت; TNFRSF; Tumor necrosis factor receptor super family; GITR; Glucocorticoid-induced tumor necrosis factor receptor; DR3; Death receptor 3; ILC2; Type II innate lymph cells; CNS; Conserved non-coding sequences; TSS; Transcription start site; TCR; T cell rece