Keywords: AMOP; adhesion-associated domain present in MUC4 and other proteins; C4BP; C4b-binding protein; CCP; complement control protein; CR1; complement receptor 1; CR3; complement receptor 3; CS; chondroitin sulfate; CSMD; CUB and Sushi multiple domains; DAF; de
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Keywords: Gene Regulation; Biomarker; Esophageal Adenocarcinoma; Diagnosis; AUC; area under the curve; BE; Barrett's esophagus; BNE; squamous epithelium from above the Barrett's segment; CI; confidence interval; FFPE; formalin-fixed, paraffin-embedded; mRNA; me
Keywords: ADCL; autosomal dominant cutis laxa; BAC; bacterial artificial chromosome; COPD; chronic obstructive pulmonary disease; ER; endoplasmic reticulum; ERK; extracellular signal-regulated kinases; hELN; human elastin gene; HGMD; Human Gene Mutation Database;
Keywords: 8-oxo-G; 8-hydroxyguanosine; ABA; abscisic acid; APX; ascorbate peroxidase; AS; alternative splicing; CEF; circled electron flux; CSD; CuZn-superoxide dismutase; DST; DownSTream; MV; methyl viologen; NDH; NADH-dehydrogenase; NMD; nonsense-mediated decay;
Keywords: 5-HT(2B); 5-hydroxytryptamine 2B receptor; ACE; angiotensin-converting enzyme; AMPK; AMP-activated protein kinase; ARB; AT1R blocker; ASK1; apoptosis signal-regulating kinase 1; AT1R; angiotensin II type 1 receptor; ATX; autotaxin; BDL; bile duct ligation
Keywords: AID; autoimmune disorders; AF; adjuvant formulations; ASIA; autoimmune/inflammatory syndrome induced by adjuvants; CFA; complete Freundâ²s adjuvant; CIA; collagen-induced arthritis; DA; dark Agouti; DC; dendritic cells; EAE; experimental autoimmune encep
Keywords: ABCA1; ATP-binding cassette, subfamily A, member 1; ABCG5; ATP-binding cassette, subfamily G, member 5; ACD; anemia of chronic disease; AI; anemia of inflammation; Apo; apolipoprotein; Arg1; arginase-1; Bach1; Btb and Cnc Homology, basic leucine zipper tr
Keywords: ABE; acetone, butanol and ethanol; B. subtilis; Bacillus subtilis; BACs; bacterial artificial chromosomes; CBM; carbohydrate binding modules; CIChE; chemically inducible chromosomal evolution; CBP; consolidated bioprocessing; C. glutamicum; Corynebacteriu
Keywords: BAP; benzyl amino purine; BC; before challenge titers; CFU; colony forming units; CT; cholera toxin; DMEM; Dulbecco's modified eagle medium; ELISA; enzyme linked immunosorbent assay; HRP; horseradish peroxidase; IBA; indole-3-butyric acid; i.p.; intraperi
Keywords: 3C; chromosome conformation capture; Abd-B; Abdominal-B; AGO2; Argonaute 2; ANT-C; Antennapedia complex; BEAF-32; boundary element-associated factor of 32Â kDa; BTB; broad-complex, tramtrack, bric-a-brac; BX-C; bithorax complex; ChIP; chromatin immunoprec
Keywords: BMI; Body mass index; CAD; Coronary artery disease; CRP; C-reactive protein; HUVECs; Human umbilical vein endothelial cells; OR; Odds ratio; PBMC; Peripheral blood mononuclear cells; SNP; Single nucleotide polymorphism; Vaspin; Visceral adipose tissue-der
Keywords: eIF; eukaryotic translation initiation factor; IC; initiation complex; TC; ternary complex; EJC; Exon Junction Complex; PABP; poly-A binding protein; SF2; Superfamily 2; DDX; DEAD-box protein; DHX; DExH-box protein; RHA; RNA helicase A; UTR; untranslated
A natural “GA” insertion mutation in the sequence encoding the 3â²UTR of CXCL12/SDF-1α: Identification, characterization, and functional impact on mRNA splicing
Keywords: aa; amino acid(s); AREs; AU-rich elements; ARMS; amplification refractory mutation system; bp; base pair(s); cDNA; DNA complementary to RNA; cpm; counts per minute; CXCL; C-X-C motif chemokine ligand; CXCR; C-X-C chemokine receptor; d; deoxyribo; DMSO; di
Effects of fasting and re-feeding on mstn and mstnb genes expressions in Cranoglanis bouderius
Keywords: MSTN; myostatin; MSTNb; myostatinb; TGF-β; transforming growth factor-β; MS222; 3-aminobenzoic acid ethyl ester methane sulfonate; S.E.; standard error; Fig.; Figure; Tab.; Table; pI; theoretical isoelectic point; MW; molecular weight; CDS; coding seque
Chicken GHR antisense transcript regulates its sense transcript in hepatocytes
Keywords: NATs; Natural antisense transcripts; miRNA; microRNA; GH; Growth hormone; IGFs; insulin-like growth factors; bp; base pair(s); exon; exoniensis; GHR; Growth hormone receptor; GHR-S; GHR sense transcript; GHR-AS; GHR antisense transcript; LncRNAs; Long non
Emerging microRNAs in cancer diagnosis, progression, and immune surveillance
Keywords: Cancer immunity; miR-21; miR-375; oncomiR; Prognostic biomarker; RAS pathway; AKT; serine/threonine-protein kinase; CIP2A; cancerous inhibitor of PP2A; ERK; extracellular-signal-regulated kinase; FFPE; formalin-fixed, paraffin-embedded; HNC; head and neck
Vitamin D binding protein polymorphisms influence susceptibility to hepatitis C virus infection in a high-risk Chinese population
Keywords: HCV; hepatitis C virus; WHO; World Health Organization; 1,25(OH)2D3; 1,25-dihydroxyvitamin D3; 25(OH)D; 25-hydroxyvitamin D; SVR; sustained viral response; VDBP; vitamin D binding protein; SNP; single nucleotide polymorphism; HD; hemodialysis; HIV; human
Upregulation of miR-215 exerts neuroprotection effects against ischemic injury via negative regulation of Act1/IL-17RA signaling
Keywords: Act1; nuclear factor activator 1; CCA; common carotid artery; ECA; external carotid artery; FITC; fluorescein isothiocyanate; HEK293T; human embryonic kidney 293T; ICA; internal carotid artery; IL-17RA; interleukin-17 receptor A; JNK; c-JuneN-terminal kin
microRNA 125a Regulates MHC-I Expression on Esophageal Adenocarcinoma Cells, Associated With Suppression of Antitumor Immune Response and Poor Outcomes of Patients
Keywords: miR-125; miR-148; Antitumor Immune Response; Immune Checkpoints; CTL; cytotoxic T lymphocytes; CTLA-4; cytotoxic T lymphocyte associated protein 4; EAC; esophageal adenocarcinoma; gMFI; geometric mean fluorescence intensity; HLA-A/B/C; human leukocyte ant
Association between miR-218 rs11134527 polymorphism and risk of selected types of cancer in Asian population: An updated meta-analysis of case-control studies
Keywords: CIs; confidence intervals; ESCC; esophageal squamous cell carcinoma; MFE; minimum free energy; miRNA; microRNA; NSSLC; non-small cell lung cancer; ORs; odds ratio; PCR; polymerase chain reaction; RFLP; restriction fragments length polymorphism; UTR; untra
Molecular cloning, characterization, and expression analysis of the three cysteine and glycine-rich protein genes in the Chinese fire-bellied newt Cynops orientalis
Keywords: CRP; cysteine- and glycine-rich protein; CSRP1; cysteine- and glycine-rich protein 1; CSRP2; cysteine- and glycine-rich protein 2; CSRP3; cysteine- and glycine-rich protein 3; ORF; open reading frame; LIM; lin-11, isl-1 and mec-3; ANOVA; one-way analysis
Transcriptional activation of a chimeric retrogene PIPSL in a hominoid ancestor
Keywords: FBS; fetal bovine serum; PIP5K1A; phosphatidylinositol-4-phosphate 5-kinase, type I, alpha; PLCE1; phospholipase C epsilon 1; PP; processed pseudogene; PSMD4; proteasome 26S subunit, non-ATPase 4; PtdIns(4,5)P2; phosphatidylinositol-4,5-bisphosphate; RACE
MiR-1275 promotes cell migration, invasion and proliferation in squamous cell carcinoma of head and neck via up-regulating IGF-1R and CCR7
Keywords: SCCHN; Squamous cell carcinoma of head and neck; IGF-1R; insulin like growth factor 1 receptor; CCR7; C-C chemokine receptor type 7; cDNA; DNA complementary to RNA; UTR; untranslated region(s); TCGA; The Cancer Genome Atlas database; RT-PCR; Real-time pol
Endothelial replicative senescence delayed by the inhibition of MTORC1 signaling involves MicroRNA-107
Keywords: SA-β gal; senescence-associated beta galactosidase; MTOR; mammalian target of rapamycin; 4EBP1; eIF4E binding protein 1; S6K1; S6 kinase 1; miRNA; microRNA; RISC; RNA-induced silencing complex; UTR; un-translated region; HUVEC; human umbilical vein endot
Therapeutic applications of zebrafish (Danio rerio) miRNAs linked with human diseases: A prospective review
Keywords: miRNA; Micro RNA; RNA; Ribonucleic acid; RNase III; Ribonuclease III; mRNA; Messenger RNA; RISC; RNA-induced silencing complex; UTR; Untranslated region; Pre-miRNA; Precursor micro RNA; DGCR8; Digeorge syndrome chromosomal [or critical] region 8; TRBP; Tr
Rice SDSFL1 plays a critical role in the regulation of plant structure through the control of different phytohormones and altered cell structure
Keywords: ABA; abscisic acid; Arg; arginine; bp; base pair; BR; brassinosteroid; Chl; chlorophyll; Ci; intracellular CO2 concentration; EMS; ethylmethane sulfonate; GA; gibberellins; Gs; stomatal conductance; IAA; indole 3-acetic acid; InDel; insertion/deletion; kb
High-throughput gene expression analysis identifies p53-dependent and -independent pathways contributing to the adrenocortical dysplasia (acd) phenotype
Keywords: TPP1; protein encoded by adrenocortical dysplasia gene; Acd; adrenocortical dysplasia gene; acd; adrenocortical dysplasia mutation; p53; transformation related protein 53; DNA; Deoxyribonucleic acid; DC; Dyskeratosis congenita; HHS; Hoyeraal-Hreidarsson s
Discovery and expression analysis of novel transcripts of the human SR-related CTD-associated factor 1 (SCAF1) gene in human cancer cells using Next-Generation Sequencing
Keywords: cDNA; complementary DNA; CTD; C-terminal domain; DFS; disease-free survival; IGV; Integrative Genomics Viewer; ISPs; Ion Sphere⢠Particles; NGS; Next-Generation Sequencing; ncRNAs; non-coding RNAs; NMD; non-sense-mediated mRNA decay; ORF; open reading f
De-novo assembly and transcriptome analysis of Odontesthes argentinensis gill tissue, with development of single sequence repeat markers
Keywords: BLAST; Basic Local Alignment Search Tool; bp; base pair(s); CDS; coding sequence; cDNA; DNA complementary to RNA; GO; Gene Ontology; INDEL; insertion or deletion of bases; KEGG; Kyoto Encyclopedia of Genes and Genomes; mRNA; messenger RNA; UTR; untranslat
Identification of a type I interferon (IFN) gene from Japanese eel and its expression analysis in vivo and in vitro
Keywords: cDNA; DNA complementary to RNA; mRNA; messenger RNA; ORF; open reading frame; RACE; rapid amplification of cDNA ends; UTR; untranslated region; IFN; interferon; AjIFN; IFN gene from Japanese eel (Anguilla japonica); qRT-PCR; quantitative real-time polymer
Novel fusion transcripts in bladder cancer identified by RNA-seq
Keywords: Urothelial carcinoma; RNA-seq; Novel fusion transcripts; UC; urothelial carcinoma; FFPE; formalin-fixed paraffin-embedded; RT-PCR; reverse transcription polymerase chain reaction; UTR; untranslated region; CDS; coding sequence; TCGA; the Cancer Genome Atl
A role for mRNA trafficking and localized translation in peroxisome biogenesis and function?
Keywords: ChIP; chromatin immunoprecipitation; CLIP; crosslinking immunoprecipitation; ER; endoplasmic reticulum; FISH; fluorescent in situ hybridization; GET; Golgi-ER trafficking; ISH; in situ hybridization; MFP; multifunctional protein; mPP; mRNA encoding peroxi
CRISPR interference-guided balancing of a biosynthetic mevalonate pathway increases terpenoid production
Keywords: CRISPR; Clustered regularly interspaced short palindromic repeats; CRISPRi; Clustered regularly interspaced short palindromic repeats interference; MVA; mevalonate; sgRNA; single guide RNA; dCas9; inactive Cas9; IPP; isopentenyl diphosphate; DMAPP; dimeth
Muscle-specific microRNAs in skeletal muscle development
Keywords: HDAC4; histone deacetylase 4; MEF2; myocyte enhancer factor 2; miRNA; microRNA; MRFs; myogenic regulatory factors; MYF5; myogenic factor 5; MYF6; myogenic factor 6 (herculin); MYH6; myosin, heavy chain 6, cardiac muscle, alpha; MYH7; myosin, heavy chain 7
Redox cycling metals: Pedaling their roles in metabolism and their use in the development of novel therapeutics
Keywords: AC; adenylyl cyclase; AI; anemia of inflammation; cdks; cyclin-dependent kinases; bFGF; basic fibroblast growth factor; BpT; 2-benzoylpyridine thiosemicarbazone; Bp4eT; 2-benzoylpyridine 4-ethyl-3-thiosemicarbazone; Bp44mT; 2-benzoylpyridine 4,4-dimethyl-
MicroRNA-128 targets myostatin at coding domain sequence to regulate myoblasts in skeletal muscle development
Keywords: CDS; coding domain sequence; DM; differentiation medium; EdU; 5-ethynyl-2â²-deoxyuridine; GM; Growth medium; miRNA; microRNA; MSTN; myostatin; mTOR; mammalian target of rapamycin; Myf5; myogenic factor 5; MyHC; myosin heavy chain; MyoG; myogenin; Pax; pa
Low-temperature microRNA expression in the painted turtle, Chrysemys picta during freezing stress
Keywords: miRNA; microRNA; mRNA; message RNA; GO; gene ontology; RT-PCR; real-time polymerase chain reaction; UTR; untranslated region; Cryo-mIR; miR-16; miR-21; Metabolic rate depression; Hypometabolism;
Molecular cloning, characterization, and expression of sheep FGF5 gene
Keywords: FGF5; fibroblast growth factor 5 gene; SNP; single-nucleotide polymorphism; RACE; rapid amplification of the cDNA ends; HA; hemagglutinin epitope; DMEM; Dulbecco's modified Eagle's medium; CDS; complete coding sequence; aa; amino acid; ORF; open reading f
miR-206 modulates lipopolysaccharide-mediated inflammatory cytokine production in human astrocytes
Keywords: LPS; lipopolysaccharide; CCL5; chemokine (C-C motif) ligand 5; FL; full length; SOCS-1; suppressor of cytokine signalling-1; MKP-1; mitogen-activated protein kinase phosphatase1; MRE; miRNA recognition elements; BS; binding site; ERK; extracellular regula
MiR-193a-3p promotes the multi-chemoresistance of bladder cancer by targeting the HOXC9 gene
Keywords: BCa; bladder cancer; MiR; microRNA; HCC; hepatocellular cancer; Pi; pirarubicin; Pa; paclitaxel; Ad; adriamycin; EH; epirubicin hydrochloride; Ci; cisplatin; 5-FU; 5-fluorouracil; UTR; untranslated region; HOXC9; homeobox C9; TERT; telomerase reverse tran
Hepsin inhibits CDK11p58 IRES activity by suppressing unr expression and eIF-2α phosphorylation in prostate cancer
Keywords: CHO; Chinese hamster ovary; CHX; cycloheximide; DIG; digoxigenin; FACS; fluorescence-activated cell sorting; GCN2; general control non-derepressible-2; HRI; heme regulated inhibitor of translation; IRES; internal ribosome entry sites; ITAFs; IRES trans-ac
Disordered signaling governing ferroportin transcription favors breast cancer growth
Keywords: FPN; ferroportin; Nrf2; nuclear factor erythroid 2-like 2; MZF-1; myeloid zinc finger-1; IRP; iron-regulatory protein; IRE; iron-responsive element; UTR; untranslated region; PBS; phosphate-buffered saline; ChIP; chromatin immunoprecipitation; TSS; transc
ERK1/2 can feedback-regulate cellular MEK1/2 levels
Keywords: 4-HT; 4-hydroxytamoxifen; ERK; extracellular signal-regulated kinase; GAPDH; glyceraldehyde 3-phosphate dehydrogenase; MEK; mitogen-activated protein kinase kinase; UTR; untranslated region; Raf; MEK1; MEK2; ERK1/2; Feedback regulation;
MiR-10a and miR-181c regulate collagen type I generation in hypertrophic scars by targeting PAI-1 and uPA
Keywords: ECM; extracellular matrix; HS; hypertrophic scar; HF; hypertrophic scar-derived fibroblast; NF; normal skin-derived fibroblast; mRNA; messenger RNA; miRNA; microRNA; RT-PCR; reverse transcription polymerase chain reaction; UTR; untranslated region; uPA; u
Depletion of poly(A)-specific ribonuclease (PARN) inhibits proliferation of human gastric cancer cells by blocking cell cycle progression
Keywords: BSA; bovine serum albumin; CDK; cyclin-dependent kinase; DDR; DNA damage response; DMEM; Dulbecco's modified Eagle's medium; EEP; endonuclease-exonuclease-phosphatase; HRP; Horseradish peroxidase; HU; hydroxyl urea; M-MLV; Moloney murine leukemia viru
MicroRNA-30c-2-3p negatively regulates NF-κB signaling and cell cycle progression through downregulation of TRADD and CCNE1 in breast cancer
Keywords: NF-κB signaling; Breast cancer; MicroRNA; Cell cycle progression; CSF2; colony stimulating factor 2; CCNE1; cyclin E1; CCND1; cyclin D1; CDK; cyclin-dependent kinase; CTRL; control; CXCL; chemokine (C-X-C motif) ligand; ER; estrogen receptor; I.B; intens
Differential contribution of key metabolic substrates and cellular oxygen in HIF signalling
Keywords: ACC; acetyl-CoA carboxylase; Akt; protein kinase B (PKB); α-KG; α-ketoglutarate; AMPK; AMP-activated protein kinase; BPTES; (bis-2-(5-phenylacetamido-1,2,4-thiadiazol-2-yl)ethyl sulfide; DIC; differential interference contrast; DMEM; Dulbecco׳s Modifie
Peroxisome proliferator-activated receptor-γ (PPAR-γ) agonist inhibits collagen synthesis in human hypertrophic scar fibroblasts by targeting Smad3 via miR-145
Keywords: Fibrosis; PPAR-γ agonist; Hypertrophic scar fibroblasts; miR-145; Smad3; Col1; ECM; extracellular matrix; HSFB; hypertrophic scar-derived fibroblast; RT-PCR; reverse transcriptase-PCR; UTR; untranslated region; PPAR-γ; peroxisome proliferator-activated
Functional polymorphisms in Nrf2: implications for human disease
Keywords: AAO; age at onset; ALI; acute lung injury; AMD; age-related macular degeneration; ARE; antioxidant response element; BPD; bronchopulmonary dysplasia; β-TrCP; β-transducin repeats-containing proteins; CCA; cholangiocarcinoma; Cns; non-synonymous coding;
Cell type-specific reciprocal regulation of HIF1A gene expression is dependent on 5â²- and 3â²-UTRs
Keywords: Hypoxia; HIF-1α; UTR; Translation; Transcription;