Keywords: تجزیه و تحلیل سریال بیان ژن; Abiotic stress tolerance; Genomics and genetics; Molecular markers; Whole-genome association study; Next-generation sequencing (NGS); FAO; Food & Agricultural organization; NGS; Next-generation sequencing; BAC; Bacterial artificial chromosome; QTL; Quanti
مقالات ISI تجزیه و تحلیل سریال بیان ژن (ترجمه نشده)
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Keywords: تجزیه و تحلیل سریال بیان ژن; 20SPβ4; 20S proteasome beta 4 subunit; AAT; Na+-dependent neutral amino acid transporter; ABA; Abscisic acid; ACC; acetyl-CoA carboxylase; ACCD; 1-aminocyclopropane-1-carboxylate deaminase; ALD; Fructose-bisphosphate aldolase; AP; aspartic proteinase; AP
Keywords: تجزیه و تحلیل سریال بیان ژن; FEP; first-episode psychosis; PCR; polymerase chain reaction; PANSS; Positive and Negative Syndrome Scale; GABRR2; gamma-aminobutyric acid (GABA) receptor, rho 2; GABA; gamma-aminobutyric acid; mRNA; messenger ribonucleic acid; RNA; ribonucleic acid; qPCR
Transcriptomic analysis of chicken cochleae after gentamicin damage and the involvement of four signaling pathways (Notch, FGF, Wnt and BMP) in hair cell regeneration
Keywords: تجزیه و تحلیل سریال بیان ژن; Transcriptomic; Chicken cochlea; Signaling pathway; Regeneration; Antibiotic toxicity; MAPK; mitogen-activated protein kinase; FGF; fibroblast growth factor; TGF-β; transforming growth factor-β; BMP; bone morphogenetic protein; SAGE; serial analysis of
Insights of Lr28 mediated wheat leaf rust resistance: Transcriptomic approach
Keywords: تجزیه و تحلیل سریال بیان ژن; SAGE; Serial Analysis of Gene Expression; SOLiD; Sequencing by Oligonucleotide Ligation and Detection; TA; transcript assembly; HR; hypersensitive response; PRGdb; plant resistant gene database; ROS; reactive oxygen species; NBS-LRR; nucleotide binding si
Quantitative proteomics in Giardia duodenalis—Achievements and challenges
Keywords: تجزیه و تحلیل سریال بیان ژن; 2-DE; two-dimensional gel electrophoresis; ADI; arginine deiminase; AUC; area under the curve; CW; cyst wall; CWP; cyst wall protein; DDA; data-dependent acquisition; DIA; data-independent acquisition; ERIF; environmentally resistant infective form; ESV;
Feature selection based on closed frequent itemset mining: A case study on SAGE data classification
Keywords: تجزیه و تحلیل سریال بیان ژن; Closed frequent itemset mining; Feature selection; Serial analysis of gene expression; Extreme learning machine; Support vector machine; Classification
Transcriptomic analysis of Rongchang pig brains and livers
Keywords: تجزیه و تحلیل سریال بیان ژن; RNA-seq; RNA sequencing; DEGs; differentially expressed genes; NMS; neuromedin S; MSH; melanocyte-stimulating hormone; ECLP; extracorporeal liver perfusion; SAGE; serial analysis of gene expression; IGFBPs; insulin-like growth factor binding proteins; qRT
Transcriptome analysis of grain-filling caryopses reveals the potential formation mechanism of the rice sugary mutant
Keywords: تجزیه و تحلیل سریال بیان ژن; RNA-Seq; RNA sequencing; FDR; false discovery rate; DAF; day after flowering; DEGs; differentially expressed genes; OsAGPS; Oryza sativa ADP-glucose pyrophosphorylase small subunit; OsAGPL; Oryza sativa ADP-glucose pyrophosphorylase large subunit; AGPase;
Screening and identification of soybean seed-specific genes by using integrated bioinformatics of digital differential display, microarray, and RNA-seq data
Keywords: تجزیه و تحلیل سریال بیان ژن; qRT-PCR; quantitative reverse transcription polymerase chain reaction; DDD; digital differential display; DAF; day after flowering; GO; gene ontology; NGS; next-generation sequencing; EST; expressed sequence tag; SAGE; serial analysis of gene expression;
Biomarkers for virus-induced hepatocellular carcinoma (HCC)
Keywords: تجزیه و تحلیل سریال بیان ژن; AFP; α-fetoprotein; HCC; hepatocellular carcinoma; HBV/HCV; Hepatitis B virus/C virus; DCP; des-gamma-carboxy prothrombin; GP73; Golgi protein; GPC3; Glypican-3; CD10; Cluster of differentiation 10; CD36; Cluster of differentiation 36; SAGE; serial analy
RNA sequencing and transcriptomal analysis of human monocyte to macrophage differentiation
Keywords: تجزیه و تحلیل سریال بیان ژن; MDP; dendritic cell progenitor; SAGE; serial analysis of gene expression; RNA-seq; Illumina mRNA sequencing; PBMCs; peripheral blood mononuclear cells; RPKM; reads per kilobase of exon model per million; DEGs; differentially expressed genes; KEGG; Kyoto E
Gene expression profile of the cynobacterium synechocystis genome
Keywords: تجزیه و تحلیل سریال بیان ژن; CAI; Codon adaptation index; ORF; Open reading frame; PHE; Predicted highly expressed; PS; Photosystem; RCA; Relative codon adaptation; RCBS; The score of relative codon usage bias; RP; Ribosomal protein; SAGE; Serial analysis of gene expression; TF; Tran
Reduced expression of the DOG1 gene in Arabidopsis mutant seeds lacking the transcript elongation factor TFIIS
Keywords: تجزیه و تحلیل سریال بیان ژن; TFIIS; Transcript elongation; Seed dormancy; Transcript profiling; DAF; days after flowering; DOG1; delay of germination 1; QTL; quantitative trait locus; rtPCR; reverse-transcribed polymerase chain reaction; SAGE; serial analysis of gene expression;
Molecular biocompatibility evaluation of poly(d,l-lactic acid)-modified biomaterials based on long serial analysis of gene expression
Keywords: تجزیه و تحلیل سریال بیان ژن; Serial analysis of gene expression; Polylactic acid; Molecular biocompatibility; Surface modification;
Expression of two novel transcripts in the mouse definitive endoderm
Keywords: تجزیه و تحلیل سریال بیان ژن; Mouse; Embryo; Gastrulation; Definitive endoderm; Node; Posterior notochord; Serial analysis of gene expression; SAGE; AK014119; AK084355; Ende; Npe; Pyy; Hex
A Poisson-based adaptive affinity propagation clustering for SAGE data
Keywords: تجزیه و تحلیل سریال بیان ژن; Poisson distribution; Serial analysis of gene expression; Affinity Propagation; Clustering
Increase in Dual specificity phosphatase 1, TGF-beta stimulated gene 22, domain family protein 3 and Luc7 homolog (S. cerevisiae)-like messenger RNA after mechanical asphyxiation in the mouse lung
Keywords: تجزیه و تحلیل سریال بیان ژن; Dusp-1; TSC22d3; Luc7l; Serial analysis of gene expression; Hanging; Asphyxia; Lung; Mouse
Activation of lipogenic pathway correlates with cell proliferation and poor prognosis in hepatocellular carcinoma
Keywords: تجزیه و تحلیل سریال بیان ژن; HCC; hepatocellular carcinoma; SREBF1; sterol regulatory element binding factor 1; HBV; hepatitis B virus; HCV; hepatitis C virus; SAGE; serial analysis of gene expression; RT-PCR; reverse transcription-polymerase chain reaction; IHC; immunohistochemistry
A Gene Expression Classifier of Node-Positive Colorectal Cancer
Keywords: تجزیه و تحلیل سریال بیان ژن; SAGE; serial analysis of gene expression;
Increase in proto-oncogene mRNA transcript levels in bovine lymphoid cells infected with a cytopathic type 2 bovine viral diarrhea virus
Keywords: تجزیه و تحلیل سریال بیان ژن; Serial analysis of gene expression; Real-time PCR; Housekeeping gene internal control; Translational repression
Effects of dihydrotestosterone on gene expression in mammary gland
Keywords: تجزیه و تحلیل سریال بیان ژن; Mammary gland; Dihydrotestosterone; Serial analysis of gene expression; Transcriptome; Androgen-regulated genes
Endosialin/TEM 1/CD248 is a pericyte marker of embryonic and tumor neovascularization
Keywords: تجزیه و تحلیل سریال بیان ژن; TEM; tumor endothelial marker; NG2; neurite growth proteoglycan 2; SAGE; serial analysis of gene expression; DNP; dinitrophenol; FBS; fetal bovine serum; PE; phycoerythrin; PBS; phosphate-buffered saline; CD146; P1H12; BAC; bacterial artificial chromosome
Identification of novel candidate tumour marker genes for intrahepatic cholangiocarcinoma
Keywords: تجزیه و تحلیل سریال بیان ژن; ICC; intrahepatic cholangiocarcinoma; HCC; hepatocellular carcinoma; AFP; alpha-foetoprotein; KRT; keratin; CEA; carcinoembryonic antigen; CA19-9; carbohydrate antigen 19-9; SAGE; serial analysis of gene expression; HBV; hepatitis B virus; HCV; hepatitis
The Schistosoma mansoni transcriptome: An update
Keywords: تجزیه و تحلیل سریال بیان ژن; Trematode; Schistosomiasis; Expressed sequence tags; Transcriptome; cDNA; complementary DNA; mRNA; messenger RNA; STS; sequence-tagged sites; ORESTES; Open Reading Frame Expressed Sequence Tags; RGMG; Minas Gerais Genome Network; CDD; Conserved Domain Dat
Relationship Between Age-Related Macular Degeneration-Associated Variants of Complement Factor H and LOC387715 With Coronary Artery Disease
Keywords: تجزیه و تحلیل سریال بیان ژن; AMD; age-related macular degeneration; CAD; coronary artery disease; CFH; complement factor H; CI; confidence interval; CRP; C-reactive protein; HDL; high-density lipoprotein; LDL; low-density lipoprotein; OMIM; Online Mendelian Inheritance in Man; OR; od
Genome-wide analysis of factors regulating gene expression in liver
Keywords: تجزیه و تحلیل سریال بیان ژن; bp; base pairs; RNA; Ribonucleic acid; SAGE; Serial Analysis of Gene Expression; RAM; Random Access Memory; NCBI; National Center for Biotechnology Information; EBI; European Bioinformatics Institute; Mb; mega base pairs; G; Guanoside; C; Cytidine; T; Thy
Genes encoding the PR-4 protein wheatwin are developmentally regulated in wheat grains and respond to high temperatures during grainfill
Keywords: تجزیه و تحلیل سریال بیان ژن; 2-DE; two-dimensional gel electrophoresis; 2-DE/MS; two-dimensional gel electrophoresis/mass spectrometry; BTH; benzo(1,2,3)thiadiazole-7-carbothionic acid S-methyl ester; DPA; days post-anthesis; ESTs; expressed sequence tags; JA; jasmonic acid; MJ; meth
Influence of the transposable element neighborhood on human gene expression in normal and tumor tissues
Keywords: تجزیه و تحلیل سریال بیان ژن; TE; Transposable Element; ORF; Open Reading Frame; LINE; Long Interspersed Nuclear Element; SINE; Short Interspersed Nuclear Element; LTR; Long Terminal Repeat; EST; Expressed Sequence Tag; SAGE; Serial Analysis of Gene Expression; endogenous retrovirus;
A review of the functional role and of the expression profile of retinoid signaling and of nuclear receptors in human spinal cord
Keywords: تجزیه و تحلیل سریال بیان ژن; Retinoid signaling; Nuclear receptors; Spinal cord; Amyotrophic lateral sclerosis; Serial analysis of gene expression; Microarrays
Bone Morphogenetic Protein 4 Expressed in Esophagitis Induces a Columnar Phenotype in Esophageal Squamous Cells
Keywords: تجزیه و تحلیل سریال بیان ژن; aRNA; antisense RNA; BE; Barrett's esophagus; BMP-4; bone morphogenetic protein 4; CK; cytokeratin; DAPI; 4â²,6-diamidino-2-phenylindole; SAGE; serial analysis of gene expression; TGF; transforming growth factor;
Capucin: A novel striatal marker down-regulated in rodent models of Huntington disease
Keywords: تجزیه و تحلیل سریال بیان ژن; Gene expression profiling; Serial analysis of gene expression; Brain; Corpus striatum; Biological marker; Golgi apparatus; In situ hybridization; Huntington disease
Human mesenchymal stem cell subpopulations express a variety of neuro-regulatory molecules and promote neuronal cell survival and neuritogenesis
Keywords: تجزیه و تحلیل سریال بیان ژن; Mesenchymal stem cells; Marrow stromal cells; Neurotrophins; Serial analysis of gene expression; Neuritogenesis; SH-SY5Y
New approaches to identification of antigenic candidates for future prostate cancer immunotherapy
Keywords: تجزیه و تحلیل سریال بیان ژن; AMACR; α-methylacyl-CoA racemase; cDNA; complementary deoxyribonucleic acid; CTA; cancer-testis antigen(s); CTL; cytolytic T lymphocyte; ELISPOT; enzyme-linked immunosorbent spot assay; EpCAM; epithelial cell adhesion molecule; HLA; human leukocyte antig
List of lists-annotated (LOLA): A database for annotation and comparison of published microarray gene lists
Keywords: تجزیه و تحلیل سریال بیان ژن; AML; acute myeloid leukemia; ApoD; apolipoprotein D; ESC; embryonic stem cells; LOLA; list of lists annotated; NPC; neural progenitor cells; RDBMS; relational database management system; RPC; retinal progenitor cells; SAGE; serial analysis of gene express
TAGmapper: A web-based tool for mapping SAGE tags
Keywords: تجزیه و تحلیل سریال بیان ژن; SAGE; Serial analysis of gene expression; EST; Expressed sequence tag; Nrdb; Non-redundant database; RT-PCR; reverse transcriptase-polymerase chain reaction; Expressed sequence tag: Serial Analysis of Gene Expression; Annotation; Bioinformatics;
Identification of cold acclimated genes in leaves of Citrus unshiu by mRNA differential display
Keywords: تجزیه و تحلیل سریال بیان ژن; CBF; C repeat-binding proteins; cDNA; DNA complementary to RNA; AFLP; amplified fragment length polymorphism; DDRT-PCR; differential display reverse transcriptase polymerase chain reaction; DNase; deoxyribonuclease; dNTP; deoxyribonucleoside triphosphate;
A Comparative Analysis by SAGE of Gene Expression Profiles of Barrett's Esophagus, Normal Squamous Esophagus, and Gastric Cardia
Keywords: تجزیه و تحلیل سریال بیان ژن; BE; Barrett's esophagus; CK; cytokeratin; FABP1; fatty acid binding protein 1; RT-PCR; reverse-transcription polymerase chain reaction; SAGE; serial analysis of gene expression; TFF; trefoil factor;
The top 10 most abundant transcripts are sufficient to characterize the organs functional specificity: evidences from the cortex, hypothalamus and pituitary gland
Keywords: تجزیه و تحلیل سریال بیان ژن; ACTH; adrenocorticotropic hormone; bp; base pair(s); CCD; comparative count display; cDNA; DNA complementary to RNA; ds; double strand; GAPDH; glyceraldehyde-3-phosphate dehydrogenase; GH; growth hormone; GNAS; guanine nucleotide binding protein alpha sti
Reduction of the transcription level of the mitochondrial genome in human glioblastoma
Keywords: تجزیه و تحلیل سریال بیان ژن; Astrocytic gliomas; Glioblastoma; Differential expression; Mitochondrial genes; Differential hybridization; Serial analysis of gene expression;
SIRPα negatively regulates differentiation of PC12 cell
Keywords: تجزیه و تحلیل سریال بیان ژن; BDNF; brain-derived neurotrophic factor; CAMs; Cellular adhesion molecules; CEACAM; carcinoembryonic antigen associated cellular adhesion molecules; ERK; extracellular mitogen regulated kinase; ITIM; immune tyrosine-based inhibitory motif; JNK; c-jun N-te
Characterization of a complex genomic alteration on chromosome 2p that leads to four alternatively spliced fusion transcripts in the neuroblastoma cell lines IMR-5, IMR-5/75 and IMR-32
Keywords: تجزیه و تحلیل سریال بیان ژن; aa; amino acids; bp; base pair(s); HSR; homogeneous staining regions; Ig; immunoglobulin(s); kb; kilobase(s); NB; neuroblastoma; MNA; genomic amplification of the MYCN gene; ORF; open reading frame; SAGE; serial analysis of gene expression; Neuroblastoma;
Sulf-2, a Proangiogenic Heparan Sulfate Endosulfatase, Is Upregulated in Breast Cancer
Keywords: تجزیه و تحلیل سریال بیان ژن; extracellular endosulfatase; Sulf-2; breast cancer; angiogenesis; heparan sulfate; CAM; chick chorioallantoic membrane; CM; conditioned medium; DCIS; ductal carcinoma in situ; ECM; extracellular matrix; FGF; fibroblast growth factor; FGFR; fibroblast grow
Antidepressant-elicited changes in gene expression
Keywords: تجزیه و تحلیل سریال بیان ژن; ADRG; antidepressant-related gene; BDNF; brain-derived neurotrophic factor; cAMP; cyclic adenosine monophosphate; CREB; cAMP response element binding protein; CSP; cysteine string protein; ECT; electroconvulsive therapy; EST; expressed sequence tag; GAP-4
Assessment and integration of publicly available SAGE, cDNA microarray, and oligonucleotide microarray expression data for global coexpression analyses
Keywords: تجزیه و تحلیل سریال بیان ژن; SAGE; serial analysis of gene expression; GEO; Gene Expression Omnibus; GO; Gene Ontology; IEA; inferred electronic annotation; MGC; Mammalian Gene Collection; MCE; minimum number of common experiments; r; Pearson correlation; rc; correlation of Pearson c
Transcriptome analysis of rat liver regeneration in a model of oval hepatic stem cells
Keywords: تجزیه و تحلیل سریال بیان ژن; Rat liver; Liver regeneration; Partial hepatectomy; Oval cells; Serial analysis of gene expression; Transcriptome;
Functional Genomics meets neurodegenerative disorders
Keywords: تجزیه و تحلیل سریال بیان ژن; AD; Alzheimer's disease; ALS; amyotrophic lateral sclerosis; CSF; cerebrospinal fluid; DIGE; difference in-gel electrophoresis; ESI; electrospray ionization; EST; expressed sequence tag; FTD; frontotemporal dementia; HPLC; high-pressure liquid chromatogra
Roles of fascin in human carcinoma motility and signaling: Prospects for a novel biomarker?
Keywords: تجزیه و تحلیل سریال بیان ژن; ECM; extracellular matrix; EST; expressed sequence tag; GFP; green fluorescent protein; IGF-1; insulin-like growth factor-1; NGF; nerve growth factor; NSCLC; non-small cell lung cancer; PKC; protein kinase C; SAGE; serial analysis of gene expression; TSP-
Gene deregulation in gastric cancer
Keywords: تجزیه و تحلیل سریال بیان ژن; APC; adenomatous polyposis coli; CGH; comparative genomic hybridisation; ECM; extra-cellular matrix; 5-FU; 5-fluorouracil; HDGC; heritary diffuse gastric cancer; hTert; human telomerase reverse transcriptase; LOH; loss of heterozygosity; SAGE; serial anal