کد مقاله | کد نشریه | سال انتشار | مقاله انگلیسی | نسخه تمام متن |
---|---|---|---|---|
5589967 | 1570075 | 2017 | 43 صفحه PDF | دانلود رایگان |
عنوان انگلیسی مقاله ISI
The complete mitochondrial genome of Eld's deer (Rucervus eldii eldii) and its phylogenetic implications
دانلود مقاله + سفارش ترجمه
دانلود مقاله ISI انگلیسی
رایگان برای ایرانیان
کلمات کلیدی
nad1–6 and nad4LrRNAatp6 and 8rrnSCervidaeBPPcox1-3rrnLMitochondrial DNA - DNA میتوکندریاRibosomal RNA - RNA RibosomalAdenine - آدنینBayesian posterior probability - احتمال خلفی بیزیBayesian inference - تخمین بیزین یا استنباط بیزیthymine - تیمینbase pairs - جفت پایهMaximum likelihood - حداکثر احتمالmtDNA - دیانای میتوکندریاییConservation - زیستشناسی بقاcytosine - سیتوزینpolymerase chain reaction - واکنش زنجیره ای پلیمرازPCR - واکنش زنجیرهٔ پلیمرازcob - کوبGuanine - گوانین
موضوعات مرتبط
علوم زیستی و بیوفناوری
بیوشیمی، ژنتیک و زیست شناسی مولکولی
ژنتیک
پیش نمایش صفحه اول مقاله
چکیده انگلیسی
The complete mitochondrial genome of Eld's deer (Rucervus eldii eldii) has been sequenced, assembled and characterized for the first time using 25 sets of published primers. The Eld's deer, famously known as Sangai or Manipur's brow-antlered deer belongs to the family Cervidae and is critically endangered species in India which needs immediate attention and concern for wildlife conservation. The 16,357Â bp long complete mitogenome of R. e. eldii was very similar to most vertebrates in organization with 13 protein-coding genes, 22 transfer RNA, 2 ribosomal RNA and a typical non-coding control region. Its protein-coding region exhibits codon usage common to all mammals. A detailed characterization of the available mitogenomes of Artiodactyla suggested conserved nature of gene organization, codon usage, gene orientation and evolutionary rates of proteins. A detailed characterization of the available mitogenomes of Artiodactyla, suggested conserved nature of gene organization, codon usage, gene orientation and evolutionary rates of proteins. The complete mitogenome and protein-coding genes of R. e. eldii were found to be highly AÂ +Â T biased. Rate of protein evolution was highest in nad6 and lowest in cox1. The phylogenetic analyses based on concatenated amino acid and nucleotide sequences of 13 protein-coding genes provided a well-supported broader outline of Cervidae, which agree with the previously described traditional morphological classification. Besides, the well supported phylogeny of artiodactyls mitochondrial genomes helped to resolve relationships between Rucervus eldii eldii (India) and Rucervus eldii hainanus (China) being the other two Eld's deer species remains unresolved i.e. Rucervus eldii thamin (Myanmar) Rucervus eldii siamensis (Thailand). The whole mitogenome sequence of R. e. eldii will significantly benefit systematics, evolutionary studies, biogeography and conservation programs of R. e. eldii and the family Cervidae.
ناشر
Database: Elsevier - ScienceDirect (ساینس دایرکت)
Journal: Gene Reports - Volume 9, December 2017, Pages 98-107
Journal: Gene Reports - Volume 9, December 2017, Pages 98-107
نویسندگان
Wajeeda Tabasum, Drashti R. Parmar, Archana Jayaraman, Siuli Mitra, Ara Sreenivas, Vaishnavi Kunteepuram, Ajay Gaur,