Distribution of juvenile Pacific herring relative to environmental and geospatial factors in Prince William Sound, Alaska

Documenting distribution patterns of juvenile Pacific herring (Clupea pallasii) can clarify habitat preferences and provide insight into ecological factors influencing early life survival. However, few analyses relating juvenile Pacific herring density to habitat characteristics have been conducted. We sampled age-0 Pacific herring in nine bays and fjords distributed throughout Alaska's Prince William Sound during November over a 3-year period (2013-2015) and investigated associations between catch rate and habitat covariates using generalized linear mixed models. Our results indicated that the night-time distribution of age-0 Pacific herring in the pelagic environment was influenced by proximity to eelgrass (Zostera marina) beds, salinity, and water depth. Age-0 Pacific herring catch rate was negatively associated with tow depth, with herring favoring shallower water across the range of depths sampled (7.2-35.4 m). In addition, Pacific herring distribution was positively associated with fresher water within the sampled salinity gradient (24.1-32.3 psu) and proximity to eelgrass beds. Seasonal changes in juvenile Pacific herring distribution were investigated by sampling one bay over a seven month period (October-April). Age-0 Pacific herring tended to remain in the inner bay region throughout the seven months, while age-1 Pacific herring had shifted from the inner to the outer bay by spring (March-April). Additionally, catch rate of age-0 Pacific herring in areas where ice breakup had just occurred was higher than in open water, suggesting that age-0 herring preferentially select ice-covered habitats when available. Based on our results we recommend that habitat preferences of age-0 Pacific herring should be considered in the development of Pacific herring year-class strength indices from catch data.